Query= MSMg01no135_l04.b1 MSMg01no135_l04.b1 CHROMAT_FILE:
MSMg01no135_l04.b1 PHD_FILE: MSMg01no135_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:53 2005
(666 letters)
>mm_chr10_15882990_15884055
Length = 1066
Score = 1199 bits (620), Expect = 0.0
Identities = 653/664 (98%), Gaps = 3/664 (0%)
Strand = Plus / Plus
Query: 6 gaattctacaa-gtctttcatttcgttctgtctttctttcttgacccagtggtcattgaa 64
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctacaaagtctttaatttcgttctgtctttctttcttgacccagtggtcattgaa 262
Query: 65 tagaaagttgctaagtttccatgagtttataggttttctgttgttgaaatccagcatgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tagaaagttgctaagtttccatgagtttataggttttctgttgttgaaatccagcatgta 322
Query: 125 gtagcatgtttcaaagcatttctaactaccagtactttgcatcatgttcttataaaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtagcatgtttcaaagcatttctaactaccagtactttgcatcatgttcttataaaaaaa 382
Query: 185 gtgtgttaaatttaatgtctcctttattacttactatatgtagcatgaacatgaaattta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgtgttaaatttaatgtctcctttattacttactatatgtagcatgaacatgaaattta 442
Query: 245 ttatttttatgtaattttt-atcaagtgcattccacacaaaatgtgattgtgttacataa 303
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttatttttatgtaattttttatcaagtgcattccacacaaaatgtgattgtgttacataa 502
Query: 304 ttaaatatgatttgacattaaatatggaaaaattgaatatgctttgaatcctgttatatt 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 503 ttaaatatgatttgacattaaatatggaaaacttgaatatgctttgaatcctgttatatt 562
Query: 364 ttaaaaataaattctatttttt-acctttcagatatcatagtattatttatgtgtaaaaa 422
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttaaaaataaattctatttttttacctttcagatatcatagtattatttatgtgtaaaaa 622
Query: 423 atgcactagagattttcaaatcataaactcaaccagtcaaaaagaattcaaattttgaga 482
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 623 atgcactagagactttcaaatcataaactcaaccagtcaaaaataattcaaattttgaga 682
Query: 483 tccaatgttcagagtgaaaacatttctttttgttcccaggtgataactcttgtcatatag 542
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 683 tccaacgttcagagtgaaaacatatctttttgttcccaggtgataactcttgtcatatag 742
Query: 543 atcttaacatcaatccacctcttcttgtctgaagatctatttaaatggtcgagtgacaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atcttaacatcaatccacctcttcttgtctgaagatctatttaaatggtcgagtgacaaa 802
Query: 603 ttggtttagtttacagttattaagtagtatttaatatatctcatactgtgagtgatccac 662
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 803 ttggtttagtttacagttattaagtagtatttagtatatctcatactctgagtgatccac 862
Query: 663 atgt 666
||||
Sbjct: 863 atgt 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_l04.g1 MSMg01no135_l04.g1 CHROMAT_FILE:
MSMg01no135_l04.g1 PHD_FILE: MSMg01no135_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:53 2005
(634 letters)
>mm_chr10_16031446_16032480
Length = 1035
Score = 743 bits (384), Expect = 0.0
Identities = 414/424 (97%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 2 gtgatctgtactccctgactcacataaggtgtcatggtcacatgcttcaggactggagcc 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 525 gtgatctgtactccctgactcacataaggtgtcagggtcacatgcttcaggactggagcc 466
Query: 62 tagtctggagtagatgaaacccctgtcattgtcagatgtgggaatttagttgggtttcag 121
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 465 tagtctggagtagatgaaaccactgtcattgtcagatgtggaaatttagttgggtttcag 406
Query: 122 aatccactcaaccttcccagtttttgtctgttgacatgattgtattccacttcgcctaca 181
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 405 aatccactcaaccttcccagtttttgtctgttgacatgattctattccactttgcctaca 346
Query: 182 atgtatgctttcaggtttagtcatggatgcagttacttatctgttgatattatactgaga 241
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acgtatgatttcaggtttagtcatggatgcagttacttatctgttgatattatactgaga 286
Query: 242 ttttagttaacagtttttttt-cagatgagtaacgatattgaacatatttacataaattt 300
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctttagttaacagtttttttttcagatgagtaacgatattgaacatatttacataaattt 226
Query: 301 aaaatgtatttaacatgtttgaacatttaaaatataaattttaattctacattatcgatt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aaaatgtatttaacatgttcgaacatttaaaatataaattttaattctacattatcgatt 166
Query: 361 taccattgacttctctgtgtccagcttttctttgagaccagacacagcatcagaaatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 taccattgacttctctgtgtccagcttttctttgagaccagacacagcatcagaaatatt 106
Query: 421 ttgg 424
||||
Sbjct: 105 ttgg 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
