Query= MSMg01no136_p05.b1 MSMg01no136_p05.b1 CHROMAT_FILE:
MSMg01no136_p05.b1 PHD_FILE: MSMg01no136_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:29 2005
(664 letters)
>mm_chr10_16475288_16476353
Length = 1066
Score = 1189 bits (615), Expect = 0.0
Identities = 651/663 (98%), Gaps = 4/663 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagccagcttaggttacatgagactctttctctaaaaataaataaatgaataa 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagccagcttaggctacatgagactctttctctaaaaataaataaatgaataa 264
Query: 65 attttaaaaa-gttcaccattaacatcaccaacaaaaacaaagaattagggtgcagtgca 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attttaaaaaagttcaccattaacatcaccaacaaaaacaaagaattagggtgcagtgca 324
Query: 124 gaataaattgaatctacttcaacaaaagcattcatcacctcaagtaaggtaatctctctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaataaattgaatctacttcaacaaaagcattcatcacctcaagtaaggtaatctctctc 384
Query: 184 aggtaggggaatcacaaaaactgatggaaaccatcaactgagctttgaaatcaagagaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtaggggaatcacaaaaactgatggaaaccatcaactgagctttgaaatcaagagaat 444
Query: 244 ctacacaacacacatgtcttctaaacaatgtgccag-tctcggcaaaa-tcaaaacttgt 301
|||||||||||||| |||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 445 ctacacaacacacacgtcttctaaacaatgtgc-aggtctcggcaaaaatcaaaacttgt 503
Query: 302 tcaagggaaagagttttactaagtgagaataatcctggcctttgtgacctcgtaggcatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaagggaaagagttttactaagtgagaataatcctggcctttgtgacctcgtaggcatg 563
Query: 362 ttaatctgaggctaacacaaatggtaagagtacctgccctacaacatttccagagcatga 421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 ttaatctgaggctaacacaaatggtaagagtacctgcccaacaacatttccagagcatga 623
Query: 422 tctttgtgtaatatacccattgctatgtaaaacgctggacaaccctaattaagcccagag 481
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 624 tctttgtgtactatacccattgctatgtaaaacgttggacaaccctaattaagcccagag 683
Query: 482 tattatatttaatatattgaaaacacataacaatcaactatattcaataaatgggaattc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tattatatttaatatattgaaaacacataacaatcaactatattcaataaatgggaattc 743
Query: 542 ttattcattacttacctaagaaaaaattagcaaaaatgtatatagacatattataatgtc 601
|||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 744 ttattcataacttacctaagaaaaaattagcaaaaatgtacatagacatattacaatgtc 803
Query: 602 ttattataattatataacataaaatcttttcactaatatttattcttatattgttaatac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttattataattatataacataaaatcttttcactaatatttattcttatattgttaatac 863
Query: 662 tta 664
|||
Sbjct: 864 tta 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1066
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1056
Effective search space: 690624
Effective search space used: 690624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_p05.g1 MSMg01no136_p05.g1 CHROMAT_FILE:
MSMg01no136_p05.g1 PHD_FILE: MSMg01no136_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:29 2005
(625 letters)
>mm_chr10_16614207_16615231
Length = 1025
Score = 1199 bits (620), Expect = 0.0
Identities = 623/624 (99%)
Strand = Plus / Minus
Query: 2 acaccttccagatgtgtgtgtgtgtgtgtgcgtgtgcgtgtgcgtgcatgtgtgtattta 61
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 acaccttccagatttgtgtgtgtgtgtgtgcgtgtgcgtgtgcgtgcatgtgtgtattta 750
Query: 62 tgcaaggaatgattttgggataagggcataggtcataatagagctagactgagctgatga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tgcaaggaatgattttgggataagggcataggtcataatagagctagactgagctgatga 690
Query: 122 gagaccatctatgataaaatctaatactttcctttaagagtttgttatcctggcaaagta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gagaccatctatgataaaatctaatactttcctttaagagtttgttatcctggcaaagta 630
Query: 182 catctatataagggctggacgttgtttctgactcaccagctggtaagtgctatagacaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 catctatataagggctggacgttgtttctgactcaccagctggtaagtgctatagacaat 570
Query: 242 ggctcctgatgctacaaaggatattccatgacatgactattctaggacttacacaattca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ggctcctgatgctacaaaggatattccatgacatgactattctaggacttacacaattca 510
Query: 302 atttaaacttcaatttgaagacatttcaagcttaattttaaattaaaaatcaactcagta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atttaaacttcaatttgaagacatttcaagcttaattttaaattaaaaatcaactcagta 450
Query: 362 ttattatagaaaagcaatagatataaaagaagatcaattgttacccacttaatctagatg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttattatagaaaagcaatagatataaaagaagatcaattgttacccacttaatctagatg 390
Query: 422 aaaaatatctcatgtattttgtggaatccatatgatatagattgtagaacaataatgtga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaaaatatctcatgtattttgtggaatccatatgatatagattgtagaacaataatgtga 330
Query: 482 gaaaaatcactggggcaaagatgtaaattttaatttattacaattttcacacaccaaagt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaaaaatcactggggcaaagatgtaaattttaatttattacaattttcacacaccaaagt 270
Query: 542 accttgcttttgcttattaaataaatttataaaagatatttatgcactcagtgttataga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 accttgcttttgcttattaaataaatttataaaagatatttatgcactcagtgttataga 210
Query: 602 ggattgtctggttcatgatttcag 625
||||||||||||||||||||||||
Sbjct: 209 ggattgtctggttcatgatttcag 186
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
