Query= MSMg01no139_p13.b1 MSMg01no139_p13.b1 CHROMAT_FILE:
MSMg01no139_p13.b1 PHD_FILE: MSMg01no139_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:32 2005
(410 letters)
>mm_chr10_12997483_12998289
Length = 807
Score = 712 bits (368), Expect = 0.0
Identities = 395/406 (97%), Gaps = 5/406 (1%)
Strand = Plus / Minus
Query: 6 gaattctgagaagc-aaccttttgtcctgagcggtctaggaagacagctgcatagaagca 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaattctgagaagcaaaacttttgtcctgagcggtctaggaagacagctgcatagaagca 548
Query: 65 actgttgctagagatttttctaagtcctggttataaatgatatgttaaaaaatatcgact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 actgttgctagagatttttctaagtcctggttataaatgatatgttaaaaaatatcgact 488
Query: 125 agactgaaatttatcattgttgattgtctggtttttcttgcatggcttttgttcctgatg 184
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 487 agactgaaatttatcattgttgat----tggtttttcttgcatggcttttgttcctgatg 432
Query: 185 cgggtagggaagaaggatggtaacattcccatcaagctcttggttaaaaggatgcttctc 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 431 cgggtagggaagaaggatggtaacattcccatcaaggtcttggttaaaaggatgcttctc 372
Query: 245 ttggagttttggcgactttctgagtgcctggttatctgtatccctttcttcggtagagaa 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 371 ttggagttttggcgactttctgagtgcctggctatctgtatccctttcttcggtagagaa 312
Query: 305 tttcccagtttaattgtgctttgcagtggtgcctctgtaagtactttgagaggtgtcatg 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 311 tttcccagtttaattgtgctttggagtggtgcctctgtaagtactttgagaggtgccatg 252
Query: 365 gagttccttccagccaggtctgggtcagggaagcccattcattatt 410
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 251 gagttccttccagccaggtctgggtcagggaagtccattcattatt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 807
Length adjustment: 9
Effective length of query: 401
Effective length of database: 798
Effective search space: 319998
Effective search space used: 319998
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_p13.g1 MSMg01no139_p13.g1 CHROMAT_FILE:
MSMg01no139_p13.g1 PHD_FILE: MSMg01no139_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:32 2005
(328 letters)
>mm_chr10_12870186_12870913
Length = 728
Score = 634 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 1 caatatccccagacccttgctagtcccacagaacagctgcagactgcacagatggaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatatccccagacccttgctagtcccacagaacagctgcagactgcacagatggaaaca 260
Query: 61 agacgaagacaaaagcctgctgaggagcccctcctagcctgctgtagctctccctctagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacgaagacaaaagcctgctgaggagcccctcctagcctgctgtagctctccctctagg 320
Query: 121 cctatggggaaatacagcacaaagacaatctgatattgaagtaaacccctcaccacttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctatggggaaatacagcacaaagacaatctgatattgaagtaaacccctcaccacttgg 380
Query: 181 aggattattgcgataatacaagcaggcagatcatctgtcctcagccagctaaaatattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggattattgcgataatacaagcaggcagatcatctgtcctcagccagctaaaatattat 440
Query: 241 tcttttggttgttattattattttgtgtgtagagagtgtgtgtacatgttcaagttgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttttggttgttattattattttgtgtgtagagagtgtgtgtacatgttcaagttgctg 500
Query: 301 ttagtgtcttcccaagcgtgtgggggtc 328
||||||||||||||||||||||||||||
Sbjct: 501 ttagtgtcttcccaagcgtgtgggggtc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
