TGNNNNNGACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGA
ATCCGCGGAATTCTTTACTGATCCAAACCAAATGGCTGAGAAGCACCTGA
AAAAATGTTCAACATCCTTAATCATCAAAGAAATGCAAATCAAAACAACC
CTGAGATTCCACTTCACACCAGTCTGAAAGGCTAAGATCAAAAATTCAGG
TGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GCTGTTGGGATTGCAAGCTGGTACAATCACTCTGGAAATTAGTCTGGTGG
TTCCTCAGAAAATTGGACATAGTACTTCCAGAAGATCCAGCAATACCTCT
CTTGTTCATATACCCAAAAGATGTTCCAACTTTTAATACGGACATATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGTTAGAAAGAA
CCCCGTTATCCCTCAACATAAGAATGGATACAGAGGGCTGGTGAGATGGC
TCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAATT
CCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGACTTCTGACTTC
CTCTTCTGGAGTGTCTGAAGACAGTTACAGTGTACTTACATATAATAAAT
AAATAAATAAATCTTTAAAAAAAAAAGAATGGATACAGAAAATGTGGTAC
CTTTAC

NNNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGACTTGAATTTTGATAAGC
TCCAGATGTGTCCAAAATGGAAAAATATTATTTGACATCCATTTGTTTAT
AACATATTTATTTTCATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATCTGACACTTTTAAAAGCTTTTTGTGAC
AACTTCTGGTTCCCATATAGTTACAGCAAACTATAATGTTTCAGCCTGGG
ACCTTAACGAGGTCTTCATTGCAATCCTTGGGGAACTGAATGGAATTTTC
TATCTTGAACTTCTAACAGTGAATAAAACTAGTCAATAATAAAAACAATA
AAAGGAAAAGTGTTCAATTTTAAAAGGCCTTAGTGAAACGTGGTTTCAAT
GTACAAAATGGAGTCTCAGCATTTATGTCTTCTTACTATTTCCAGGTTAC
ACTGACTACCATTGATTATGTTCATGCCTCAGATTCCATTATCTAGAGTA
GATAAACTGTGTAATAAATGACTGTACTTTGTTCTCCAACATGATATCTA
GATAAGAAAGATGATCAGATAAAGTCCACATCTTAATTATCCCTTCAATT
ATTGAGTCCATGTCCACCTCCCATTATTTCATAACAAGAATTAAATTCAT
TAG

Query= MSMg01no140_c01.g1 MSMg01no140_c01.g1 CHROMAT_FILE:
MSMg01no140_c01.g1 PHD_FILE: MSMg01no140_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:45 2005
         (605 letters)



>mm_chr10_102917525_102918529
          Length = 1005

 Score =  973 bits (503), Expect = 0.0
 Identities = 556/601 (92%), Gaps = 42/601 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgacttgaattttgataagctccagatgtgtccaaaatggaaaaatattatttgacatcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tgacttgaattttgataagctccagatgtgtccaaaatggaaaaatattatttgacatcc 845

                                                                       
Query: 61  atttgtttataacatatttattttcatatatatatatatatatatatatatatatatata 120
           |||||||||||||||||||||||||                                   
Sbjct: 844 atttgtttataacatatttattttc----------------------------------- 820

                                                                       
Query: 121 tatatatatatatatatatatatctgacacttttaaaagctttttgtgacaacttctggt 180
                  ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 819 -------atatatatatatatatcagacacttttaaaagctttttgtgacaacttctggt 767

                                                                       
Query: 181 tcccatatagttacagcaaactataatgtttcagcctgggaccttaacgaggtcttcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tcccatatagttacagcaaactataatgtttcagcctgggaccttaacgaggtcttcatt 707

                                                                       
Query: 241 gcaatccttggggaactgaatggaattttctatcttgaacttctaacagtgaataaaact 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gcaatccttggggaacttaatggaattttctatcttgaacttctaacagtgaataaaact 647

                                                                       
Query: 301 agtcaataataaaaacaataaaaggaaaagtgttcaattttaaaaggccttagtgaaacg 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 646 agtcaataataaaaacaataaaaggaaaagtgttcaattttaaaaagccttagtgaaacg 587

                                                                       
Query: 361 tggtttcaatgtacaaaatggagtctcagcatttatgtcttcttactatttccaggttac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tggtttcaatgtacaaaatggagtctcagcatttatgtcttcttactatttccaggttac 527

                                                                       
Query: 421 actgactaccattgattatgttcatgcctcagattccattatctagagtagataaactgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 actgactaccattgattatgttcatgcctcagattccattatctagagtagataaactgt 467

                                                                       
Query: 481 gtaataaatgactgtactttgttctccaacatgatatctagataagaaagatgatcagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtaataaatgactgtactttgttctccaacatgatatctagataagaaagatgatcagat 407

                                                                       
Query: 541 aaagtccacatcttaattatcccttcaattattgagtccatgtccacctcccattatttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaagtccacatcttaattatcccttcaattattgagtccatgtccacctcccattatttc 347

            
Query: 601 a 601
           |
Sbjct: 346 a 346


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)