Query= MSMg01no142_p14.b1 MSMg01no142_p14.b1 CHROMAT_FILE:
MSMg01no142_p14.b1 PHD_FILE: MSMg01no142_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:21 2005
(551 letters)
>mm_chr10_33711003_33711953
Length = 951
Score = 891 bits (461), Expect = 0.0
Identities = 512/529 (96%), Gaps = 2/529 (0%)
Strand = Plus / Minus
Query: 1 acattaccataagaagtaagcgcacaccatctcctatttgtcattatttcatcaaaagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 acattaccataagaagtaagcgcacaccatctcctatttgtcattatttcatcaaaagcc 669
Query: 61 aacataaaccaggccaacactccatgattgctgagcagagtgaggtgcactcttccttcc 120
|| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 668 aatgtaaaccaggccaacactcc-tgattgctgagcagagtgaggtgcactcttccttcc 610
Query: 121 accgctcttgcccttcatccctgtctggagcagcagcgccttgattttgaataattctga 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 accactcttgcccttcatccctgtctggagcagcagcgccttgattttgaataattctga 550
Query: 181 ggagaagactagggatgtcctgagaactatattgatag-tgtgacctgtgtctcggttgc 239
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 549 aaagaagactagggatgtcctgagaactatattgatagctgcgacctgtgtctcggttgc 490
Query: 240 ttctctcttgttcagtgctgcttcctttattctcacagttgtttgctccctaaaatattc 299
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 489 ttctctcttgttcagtgctgcttcctttactctcataggtgtttgctccctaaaatattc 430
Query: 300 cccagtctgcttcctggggaaacccaacctaaaacccctaactgacctaaaacaggctgc 359
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 429 cccagtctgcttcctggggaaacccaacctaaaactcctaactgacctaaaacaggctgc 370
Query: 360 tggggtctagcactcttcagctaggacttcacttcttccctggtggagtaggtcacggtt 419
||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 369 tggggtctagcactcttcagctaggacttcacttcttccctcatggagtaggtcagggtt 310
Query: 420 tggatctgctccttgcagtgctgtgcagtctcagaggtctgcatgcttactttgtcatct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggatctgctccttgcagtgctgtgcagtctcagaggtctgcatgcttactttgtcatct 250
Query: 480 tctgtctgtagctaagattggttctagcatcttcaactgttgccatcac 528
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 249 tctgtctgtagctaagattggttctagcatcttcaactgttgtcatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_p14.g1 MSMg01no142_p14.g1 CHROMAT_FILE:
MSMg01no142_p14.g1 PHD_FILE: MSMg01no142_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:21 2005
(369 letters)
>mm_chr10_33561987_33562755
Length = 769
Score = 636 bits (329), Expect = 0.0
Identities = 359/369 (97%)
Strand = Plus / Plus
Query: 1 gatttttttaaaaagtaagaataatttattcttttcttgttattcattgccccattaata 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gatttttttaaaaagtaagaataatttattcttttcttgttattcattgttacattaata 260
Query: 61 tagagttacagattttttaaaaattcattcattataagtttaatggctcagcttgatact 120
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagatttacagatttttaaaaaattcattcattataagtttaatggctcagcttgatact 320
Query: 121 ttgatttagatctatctatctttctaagaaaagaattttcatcagagttccaaactttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgatttagatctatctatctttctaagaaaagaattttcatcagagttccaaactttgc 380
Query: 181 tgttttcaacaaagatccaacctgctggtttttactagtagacaaaagtcacaagaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttcaacaaagatccaacctgctggtttttactagtagacaaaagtcacaagaggaa 440
Query: 241 gcctttggaaaacaacaaaagaaaacgcatttgacaaacagccattaatgataaaagtct 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gcctttggaaaacaacaaaagaaaacacatttgacaaacagccattaatgataaaagtct 500
Query: 301 tggaaagattaggaatttttggtctatacctaaatataataaaaacaacacacagcaaac 360
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggaaagattaggaattcaaggcctatacctaaatataataaaaacaacacacagcaaac 560
Query: 361 ttgtagaca 369
|||||||||
Sbjct: 561 ttgtagaca 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
