ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAATCCGCGGAAT
TCTATAAGGATTGCAATGTGATGGTAAAGAACTTCTCATTAGCTCTATTT
TAGAACACCAGAGAGAACTGCTTTTCTCTTTACTAATTTTGCCCTATTCT
TACAGCAACTTGCAAGTTTTGGTTACAGTACTGAATATTTTAGCACATGT
TTATTCACTATTTTTTTTTAAATTTCCTAAGCACAATCTTTGGCCATTTT
CCTTCTTATTATCTTATTATATTAAAGACACTAAACTGTTGTTTGTTTTA
GATACATCAATTTGCCTTGTAAATAAGAAATGTTTGGGTAGCTGTCATTT
GTGTGTTACTTAAAATTTTTCTTAATCATACTCATGATGTTATTGGTACA
GCAGATTAGATCTACCCCCACTTATCAGCAGCCATAGAAAACATGTCTGC
AGGCATCATAGATATTTCTAACAAGCTATATAGTTTTCAATATATGGCAA
CATAGGGCACTTATATTATAGCATAATGCCTTCCTCAATCATTCAGATGG
CCCTGTATGTCTCCTGACTCTTTTTCAAATAATCTGTAATATTCTCTCCT
AAAAACGCGCCCCCCCTGCTATGTTTTGCCCGCCCTTTTTTTCCGTCCCC
TTATTTACCCGCATTATACATCCATTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCCGAG
AAGCACCTGAAAAAATGTTCAACATCATTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCATTAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCATCTTGTACAACCACTCTGGATA
TCAGTCTGGCAGTTCCTCATAAAATTGGACATAGTACTACCGGAGGATCC
GGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGA
AGGACACATGCTTCTTTCCCCCCACAACACCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGTCCCTCATCAGAGGAATAGATACAGAAAAT
GTGGTACATTTACCCCATGGAGCACTACTCAGCTATTATTTAGAATGAAT
TTATGAATTTCCTAGGCCTCAGGTTGAACATGGAGGTTATCATCTCTGAG
TGTTGTACCCCATTTATAAATGAACTCGGTACCTAGTGTACTCTCTGATA
ATAGAACTTTAACCCTAACACCTACCCTCCCT

Query= MSMg01no143_a17.b1 MSMg01no143_a17.b1 CHROMAT_FILE:
MSMg01no143_a17.b1 PHD_FILE: MSMg01no143_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:28 2005
         (341 letters)



>mm_chr10_31348051_31348792
          Length = 742

 Score =  630 bits (326), Expect = 0.0
 Identities = 338/342 (98%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgatggtaaagaacttctcattagctctattttagaacaccagagagaactgcttttctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatggtaaagaacttctcattagctctattttagaacaccagagagaactgcttttctc 260

                                                                       
Query: 61  tttactaattttgccctattcttacagcaacttgcaagttttggttacagtactgaatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttactaattttgccctattcttacagcaacttgcaagttttggttacagtactgaatat 320

                                                                       
Query: 121 tttagcacatgtttattcacta-tttttttttaaatttcctaagcacaatctttggccat 179
           |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tttagcacatgtttattcactatttttttttttaatttcctaagcacaatctttggccat 380

                                                                       
Query: 180 tttccttcttattatcttattatattaaagacactaaactgttgtttgttttagatacat 239
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcctacttattatcttattatattaaagacactaaactgttgtttgttttagatacat 440

                                                                       
Query: 240 caatttgccttgtaaataagaaatgtttgggtagctgtcatttgtgtgttacttaaaatt 299
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 caatttgccttgtaaataagaaatgtttgggtagctgtcatttgtgtgttccttaaaatt 500

                                                     
Query: 300 tttcttaatcatactcatgatgttattggtacagcagattag 341
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcttaatcatactcatgatgttattggtacagcagattag 542


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 742
Length adjustment: 9
Effective length of query: 332
Effective length of database: 733
Effective search space:   243356
Effective search space used:   243356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)