Query= MSMg01no144_l16.b1 MSMg01no144_l16.b1 CHROMAT_FILE:
MSMg01no144_l16.b1 PHD_FILE: MSMg01no144_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:38 2005
(582 letters)
>mm_chr10_36510749_36511728
Length = 980
Score = 1019 bits (527), Expect = 0.0
Identities = 562/575 (97%), Gaps = 7/575 (1%)
Strand = Plus / Plus
Query: 5 gaattcacacttttcacaccacaaaggacactctatagttctatgcacagttttttaata 64
|||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattcacacttttcagagcacaaaggacact--atagttctatgcacagttttttaata 262
Query: 65 tgtgtttatgcaacaagatcttaggatagtagcaaaaaaacagtgaattattcttaaaat 124
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 263 tgtgtttatgccacaagatcttaggatagtagcaaataaacagtgaattattcttaaaat 322
Query: 125 ttgaaaatctgtggaaacaaaaataaatcataatatagaaaggaaaataaacaactaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgaaaatctgtggaaacaaaaataaatcataatatagaaaggaaaataaacaactaata 382
Query: 185 gttcattccttagtaatgaggaatatcataaatgcagttaaatgttgtagggggaaaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttcattccttagtaatgaggaatatcataaatgcagttaaatgttgtagggggaaaggt 442
Query: 245 ttaaaacacacccttcttttgagttgcttaagaacagatgagaaatattcttaacagcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttaaaacacacccttcttttgagttgcttaagaacagatgagaaatattcttaacagcat 502
Query: 305 gttaccctcttccagcatcagccttaaaaacgtactccatatggttattaactaactcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gttaccctcttccagcatcagccttaaaaacgtactccatatggttattaactaactcaa 562
Query: 365 ttctcaattgcatatgcatttatatgtctcaatatgcagatatatcaatattttatatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttctcaattgcatatgcatttatatgtctcaatatgcagatatatcaatattttatatca 622
Query: 425 gtaaagggtgtttcgaataaagacctgctgatg-ggcctgaattgttctagtggaaaatt 483
|||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||
Sbjct: 623 gtaaagagtgtttcgaataaagacctgctgatgtggc-tgaattgttctagtgggaaatt 681
Query: 484 tttaattgttttactttgcattactcaagaagaaaggtaatcagaagctagatgaggttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttaattgttttactttgcattactcaagaagaaaggtaatcagaagctagatgaggttt 741
Query: 544 ttttt-gttttgttttgttttgttttgttttgttt 577
||||| |||||||||||||||||||| |||||||
Sbjct: 742 ttttttgttttgttttgttttgtttt--tttgttt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 980
Length adjustment: 10
Effective length of query: 572
Effective length of database: 970
Effective search space: 554840
Effective search space used: 554840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_l16.g1 MSMg01no144_l16.g1 CHROMAT_FILE:
MSMg01no144_l16.g1 PHD_FILE: MSMg01no144_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:38 2005
(629 letters)
>mm_chr10_36570312_36571340
Length = 1029
Score = 1011 bits (523), Expect = 0.0
Identities = 547/559 (97%), Gaps = 8/559 (1%)
Strand = Plus / Minus
Query: 79 tatcaaattacaatagaaaatatgaatattatagatttgttaaatatagtagctgaaata 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tatcaaattacaatagaaaatatgaatattatagatttgttaaatatagtagctgaaata 970
Query: 139 tatgaccgattcctttggcttattgtttaaataacttgcttccaaactttctttctcttt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 tatgaccgattcctttggcttattgtttaaataacttgcttccaaactttctttctcttt 910
Query: 199 tc------ctctctctctctctctcc--ctctctctctctctcttccttccttccttcct 250
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 909 tcctctctctctctctctctctctccctctctctctctctctcttccttccttccttcct 850
Query: 251 tccttcttttttctttctttgtcttgaaggaatttaaaggaggaaaggaatatgagagaa 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tccttcttttttctttctttgtcttgaaggaatttaaaggaggaaaggaatatgagagaa 790
Query: 311 ctgtgtggcatgacctccagtgtcctgggcacaccactcactgtggagtaaccagcactt 370
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 789 ctgtgtggcatgacctccagtgtcctgggcagaagactcactgtggagtaaccagcactt 730
Query: 371 tgtaatccttgctaagtgatgcatcttacctaacttaatattatcatctgtaaataaacc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgtaatccttgctaagtgatgcatcttacctaacttaatattatcatctgtaaataaacc 670
Query: 431 acttcagttataataacccaagaatgcactgacttttacaaacttactgacttcacagaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 acttcagttataataacccaagaatgcactgacttttacaaacttactgacttcacagaa 610
Query: 491 ctctagctaatttgaaacaaagttcatttcctctgacaaagaatagaatagtttacagta 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ctctagctaatttgaaacaaagttcatttcctctgacaaagaatagaatagtttacagta 550
Query: 551 atatttctgctaatatatgccaacatggtgtaagaaaatataattatctacctacatgat 610
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 549 atatttctgctaatatatgccaacatggtataagaaaatataattatctacctacatgat 490
Query: 611 tccagcaaaatatttagtc 629
|||||||||||||||||||
Sbjct: 489 tccagcaaaatatttagtc 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
