Query= MSMg01no150_h07.b1 MSMg01no150_h07.b1 CHROMAT_FILE:
MSMg01no150_h07.b1 PHD_FILE: MSMg01no150_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:01 2005
(661 letters)
>mm_chr10_111837491_111838551
Length = 1061
Score = 1249 bits (646), Expect = 0.0
Identities = 654/657 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtttaatacgcaagcaggctgtttacagtgatatgaatgtgcttaattaaaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gaattctgtttaataagcaagcaggctgtttacagtgatatgaatgtgcttaattaaaaa 802
Query: 65 gccttgctcacatccaaaccttaaggagagggttaattgtcagtgttcagtatacagccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gccttgctcacatccaaaccttaaggagagggttaattgtcagtgttcagtatacagccc 742
Query: 125 aagccttttgtaagtacacactgatcttatctagatacaactatcttaaaaatatgcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagccttttgtaagtacacactgatcttatctagatacaactatcttaaaaatatgcttg 682
Query: 185 catgtttgtgtatttcatgtgactaagcatcggctgcgttttctagacattggttcctat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgtttgtgtatttcatgtgactaagcatcggctgcgttttctagacattggttcctat 622
Query: 245 ttttcctaataagaaacataagcagcccgttagtgctcacgtgtcctgccgggctctcgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttcctaataagaaacataagcagcccgttagtgctcacgtgtcctgccgggctctcgt 562
Query: 305 gttgctatgcaatctgttgctatttgtaaaatatttatttcgaattactttggttggctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgctatgcaatctgttgctatttgtaaaatatttatttcgaattactttggttggctg 502
Query: 365 attcgagtttcatttccacagagagctgcagggaagcttctccaacattctaaatctatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attcgagtttcatttccacagagagctgcagggaagcttctccaacattctaaatctatc 442
Query: 425 tcaaatcccttttctctgtagacttcttagattttcatggtctggtaacaggagtacttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaatcccttttctctgtagacttcttagattttcatggtctggtaacaggagtacttt 382
Query: 485 tttccccctgctatcataccgcaagaatttcaaggatgaataaaatcacaagcaaagtgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccccctgctatcataccgcaagaatttcaaggatgaataaaatcacaagcaaagtgt 322
Query: 545 gctctgaaaaaaataatgtcccacaggagacctgctgatacagggagtaggactttgcct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctgaaaaaaataatgtcccacaggagacctgctgatacagggagtaggactttgcct 262
Query: 605 tgngagcttggaaatgtgatcctggtgtcctgctgactcattgtttcaccttgttca 661
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tgggagcttggaaatgtgatcctggtgtcctgctgactcattgtttgaccttgttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_h07.g1 MSMg01no150_h07.g1 CHROMAT_FILE:
MSMg01no150_h07.g1 PHD_FILE: MSMg01no150_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:01 2005
(635 letters)
>mm_chr10_111733848_111734882
Length = 1035
Score = 1145 bits (592), Expect = 0.0
Identities = 623/634 (98%), Gaps = 4/634 (0%)
Strand = Plus / Plus
Query: 1 caaaatgagctctcaaagaagcctaaggaaagacttcccaaggtatagagtttctagaat 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagtgagctctcaaagaagcctaaggaaagacttcccaaggtatagagtttctagaat 260
Query: 61 attgtgttacataactccactgaaggtggacctcagatggttcttactggaattttaatg 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtgttacattactccactgaaggtggacctcagatggttcttactggaattttaatg 320
Query: 121 ggctgaatagccacagtaacacaggaaaagtgatggtgcattcatttagcggaagtaata 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ggctgaatagccacagtaacacaggaaaagtgatggtgcattcatttagcagaagtaata 380
Query: 181 atttactggtgtaaggttgttttgcacctctgtaacagaatactaagaagtggataattt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 atttactggtgtaaggttgttttgcacctctgtaacagaatactaaga-gtggataattt 439
Query: 241 atagagaacagccatttattagcctgtggttcttggcgttagaaagtacaagatcaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atagagaacagccatttattagcctgtggttcttggcgttagaaagtacaagatcaaggg 499
Query: 301 accatctagaagcagctttcttcttgtgtttctcctatagcctactagaaaagagaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 accatctagaagcagctttcttcttgtgtttctcctatagcctactagaaaagagaataa 559
Query: 361 aaggggg--agagaaaaaaa-tgaagaagataatttgtaaaaattcattcctgatatgac 417
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 aagggggggagagaaaaaaaatgaagaagataatttgtaaaaattcattcctgatataac 619
Query: 418 tgatacatccttacaaagagaagcccattaatctctcagagtgttgtccccatgacccac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgatacatccttacaaagagaagcccattaatctctcagagtgttgtccccatgacccac 679
Query: 478 attacccctcttttgttgccacctctcaacatctcagcatcataggtcgtgtttgcaaaa 537
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 680 attacccctcttttgttgccacctctcaacatctcagcatcatagatcgtgtttgcaaaa 739
Query: 538 cattgagaacaatattcaaaccataacattacagtaatgtttatcttgacacacagaaat 597
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 740 cattgagaacaatattcaaaccataacattgcagtaatgtttatcttgacacacagaaat 799
Query: 598 tgagtaacgatgcaaagtaataatcacataacgg 631
|||||||| |||||||||||||||||||||||||
Sbjct: 800 tgagtaactatgcaaagtaataatcacataacgg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
