Query= MSMg01no151_l21.b1 MSMg01no151_l21.b1 CHROMAT_FILE:
MSMg01no151_l21.b1 PHD_FILE: MSMg01no151_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:38 2005
(373 letters)
>mm_chr10_65492371_65493143
Length = 773
Score = 487 bits (252), Expect = e-142
Identities = 307/354 (86%), Gaps = 44/354 (12%)
Strand = Plus / Minus
Query: 6 gaattcctttgttattaccttgttgaaaaaattttacatcaattcaagaagtcataaaat 65
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gaattcctttgttagtattttgttgaaaaaattttacatcaattcaagaagtcataaaat 660
Query: 66 atatagtatttttaaaaataacttttgtccagtcttaacatttaggttaattgtggtcac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atatagtatttttaaaaataacttttgtccagtcttaacatttaggttaattgtggtcac 600
Query: 126 tacaaagtgagtagggaaacatttctcccaaattaacatt-------------------- 165
||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tacaaagtgagtagggaaacatttctcccaaattaacattcttcgttggattgtataagt 540
Query: 166 ------------------------ctagcagacctatttattgtcaagattttattgttg 201
||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgatactaatatatttatgatttactagcagacctatttattgtcaagattttattgttg 480
Query: 202 aaagggtttttacaaactccacttctttccagatgggtcagctctctgtctgttttgaaa 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aaagggtttttacaaactccacttctttccagatgggtcagctctctgtctgttttgaaa 420
Query: 262 attttattttcacacatgatgggaattttcatcactgtgccttctatctttttt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 attttattttcacacatgatgggaattttcatcactgtgccttctatctttttt 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_l21.g1 MSMg01no151_l21.g1 CHROMAT_FILE:
MSMg01no151_l21.g1 PHD_FILE: MSMg01no151_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:38 2005
(665 letters)
>mm_chr10_65377084_65378148
Length = 1065
Score = 1162 bits (601), Expect = 0.0
Identities = 649/665 (97%)
Strand = Plus / Plus
Query: 1 agaagagacataggacgcagaagataaggcagagtacatctcaacgaatctttgtggact 60
|||||||||| || | |||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 201 agaagagacacagaatgcagaagataaggcagtgtacatctcaaagaatctttgtggact 260
Query: 61 ctcacagatgatcgcagtgaggcctgtagagaagacatcccagatccacatactagatgg 120
|||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 261 ctcacagatgatcgaagtgaggcctgtagagaagacaccccagattcacatactagatgg 320
Query: 121 tcagatcacggaagccagaatagcaaaactcacatcccgtttatggtctttgttttgtct 180
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tcagatcacggaagccagaatagcaaaactcgcatcccgtttatggtctttgttttgtcg 380
Query: 181 aaagggtcagaaggaatttttggaatctcactgacatttacaagatgcaatcagcttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagggtcagaaggaatttttggaatctcactgacatttacaagatgcaatcagcttagc 440
Query: 241 attgtatttcataaaatgtttttctaggatacatttttactacaaaatggtcttattggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtatttcataaaatgtttttctaggatacatttttactacaaaatggtcttattggt 500
Query: 301 taaggattccataaagtccaaaacaaatagttgtctgttaaccatccttcaggcacgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaggattccataaagtccaaaacaaatagttgtctgttaaccatccttcaggcacgtca 560
Query: 361 agctatgatgtcagcaccagagatcattttcctttccctggcaagaaaaatgattcaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agctatgatgtcagcaccagagatcattttcctttccctggcaagaaaaatgattcaggt 620
Query: 421 tttaacctctgaatgtcccttaaaaaacaactgcttcagtctttttatagtccattgaca 480
||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||
Sbjct: 621 tttaacctctgaatgtcccttaacatacaactgcttccgtctttttatagtccactgaca 680
Query: 481 ataaacaaaaggttctggtaccaatagcccccaagtatgctaatgtctagctagctaccc 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 ataaacaaaaggttctggtaccaatagccctcaagtatgctaatgtctagctagctaccc 740
Query: 541 agcatgcttcactctttatgtgtttgttcccttgagttcacatactgaaaccacaatcct 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcatgcttcactctttatgcgtttgttcccttgagttcacatactgaaaccacaatcct 800
Query: 601 cagtggattggtattagaaggctgataaagtagatgaacaggtggtaaaacaatgaaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cagtggattggtattagaaggctgataaagtagatgaacaggtggtaaaacaatgaaaaa 860
Query: 661 ggagc 665
|||||
Sbjct: 861 ggagc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
