Query= MSMg01no153_n07.b1 MSMg01no153_n07.b1 CHROMAT_FILE:
MSMg01no153_n07.b1 PHD_FILE: MSMg01no153_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:18 2005
(461 letters)
>mm_chr10_59089316_59090176
Length = 861
Score = 797 bits (412), Expect = 0.0
Identities = 447/462 (96%), Gaps = 9/462 (1%)
Strand = Plus / Plus
Query: 1 agagacttgaatagatactttacaagagaagacttctaaacaacccagaaagcaatagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 agagacttgaatagatactttacaagagaagacttctaaacaacccagaaagcaatagga 267
Query: 61 agggggcgtgacttcattaccaaccaattagatacaaacccaaacccacaaagctatagc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 268 agggggcgtgacttcattaccaaccaattagatacaaacc-aaacccacaatgctatagc 326
Query: 121 ccttcaagaccagggaaatggttaaaatgagaaagatacagaagatgctaaattttcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccttcaagaccagggaaatggttaaaatgagaaagatacagaagatgctaaattttcaca 386
Query: 181 agaatctggaacaaccatgaggctcataggccagtaggagtaaacactgatacagccgct 240
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 387 agaatctggaacaaccatgaggctcataggccagta------aacactgatacagccgct 440
Query: 241 gttaccagata-atagatactgttgatcagttgcaccgagatgacataaaataaagcatc 299
||||||||| | | |||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 441 gttaccaga-acacagatactgttgatcagttgcacagagatgacataaaataaagcgtc 499
Query: 300 aacaagggccccttttcttaggtttaataattccagtggactccctttgttcgctcagcc 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacgagggccccttttcttaggtttaataattccagtggactccctttgttcgctcagcc 559
Query: 360 gcaggggaggggactgtgtctagcagttgttgtcctgtagcctttatccatcagtttctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcaggggaggggactgtgtctagcagttgttgtcctgtagcctttatccatcagtttctt 619
Query: 420 tcctgtcttttcaatggcctaagatctttgtggctaggctag 461
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 620 tcctgtcttttcaatggcttaagatctttgtggctaggctag 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_n07.g1 MSMg01no153_n07.g1 CHROMAT_FILE:
MSMg01no153_n07.g1 PHD_FILE: MSMg01no153_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:18 2005
(505 letters)
>mm_chr10_59265071_59265977
Length = 907
Score = 847 bits (438), Expect = 0.0
Identities = 460/468 (98%), Gaps = 3/468 (0%)
Strand = Plus / Minus
Query: 40 atcactgacaacgtattatgttgaggttgatttctggcatctctgtaaatgtgaagagga 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 atcactgacaacgtattatgttgaggttgatttctggcatctctgtaaatgtgaagagga 848
Query: 100 gctaagagctgtcaacttggagaagtcaagagaaggaaagaggagtctggagactgtgac 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gctaagagctgtcaacttggagaagtcaagagaaggaaagaggagtctggagactgtgac 788
Query: 160 tctgtgtcccacgccaaagcgtcaacttcttctcagagccatagaatcccagagtaaaaa 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 787 tctgtgtcccacgccaaagcgtcaacttcttctcagagccatagaatcccagagt-aaaa 729
Query: 220 aaaaccttagaaatcatctagggcattataaaatggtatcaacatactggtggtaaagtg 279
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 728 aaaaccttagaaatcatctagggcattaaaaaatggtatcaacatactggtggtaaagtg 669
Query: 280 ggcaattttctggatgtcttccaaaatttaaaagctgcacagctgcaatgactaggaacg 339
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 668 ggcaattttctggctgtcttccaaaatttaaaagctgcacagctgcaacgactaggaacg 609
Query: 340 gacaggaatgctaggaagtccaggccaccagttcttcccttatttccgcttttagtaatg 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gacaggaatgctaggaagtccaggccaccagttcttcccttatttccgcttttagtaatg 549
Query: 400 gaagacctgcaggtcacactagcaggctacggtaggcactctgtggagcagagagaagtc 459
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 548 gaagacctgaaggtcacactagcaggctatggtaggcactctgtggagcagagagaagtc 489
Query: 460 agcttctgccaacacag--atagctatgagaggatgaacaaactggta 505
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 488 agcttctgccaacacagaaatagctatgagaggatgaacaaactggta 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 907
Length adjustment: 10
Effective length of query: 495
Effective length of database: 897
Effective search space: 444015
Effective search space used: 444015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
