Query= MSMg01no155_l02.b1 MSMg01no155_l02.b1 CHROMAT_FILE:
MSMg01no155_l02.b1 PHD_FILE: MSMg01no155_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:39 2005
(606 letters)
>mm_chr10_48894523_48895528
Length = 1006
Score = 1127 bits (583), Expect = 0.0
Identities = 601/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 taactgaataaaag-aataagtgagttcaacaccttcatcctgactatgagatgcaatgt 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 taactgaataaaagcaataagtgagttcaacaccttcatcctgactatgagatgcaatgt 259
Query: 60 cccatccacttcatgttcctgctaccacagccaaccatctttccataccagtatgaactc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccatccacttcatgttcctgctaccacagccaaccatctttccataccagtatgaactc 319
Query: 120 ttaactgcattcttccttattctctttgttggcttttccttctgcctctgctcccttatt 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaactgcattcttccttattccctttgttggcttttccttctgcctctgctcccttatt 379
Query: 180 ttatctggtattttgttacaataagcatgttgtctttattgtacaatgaagacattaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttatctggtattttgttacaataagcatgttgtctttattgtacaatgaagacattaaca 439
Query: 240 tggatattttatagatattagcttaatatgatttcctttaaaaagcatccattacttcta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tggatattttatagatattagcttaatatgatttcctttaaaaagcatccattacttcta 499
Query: 300 taaattaaaaaataaatgtgcaaaatcatctgagtgctgtgggtcatacctaaaatccca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaattaaaaaataaatgtgcaaaatcatctgagtgctgtgggtcatacctaaaatccca 559
Query: 360 gtaggtagaaagaagaggtaggaggattttgagttcaagtttaacctatgttacttgtct 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaggtagaaagaagaggtaggagaattttgagttcaagtttaacctatgttacttgtct 619
Query: 420 gtactcatatcaaaaaatagcaccaacagcaccaacaacagaatttgtgagatcatatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtactcatatcaaaaaatagcaccaacagcaccaacaacagaatttgtgagatcatatta 679
Query: 480 atcacaaatggaaatttacttttatttttgaggtcttatctatatattacattcctgaaa 539
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 680 atcacaaatggtaatttacttttatttttgaggtcttatctatatatcacattcctgaaa 739
Query: 540 aattaatgttataaaaactttacttaaaataaatttttaaattctacttgcataggttct 599
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 740 aattaatgttataaaaactttacttaaaataaatttttaaattctatttgcataggttct 799
Query: 600 tttcttt 606
|||||||
Sbjct: 800 tttcttt 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_l02.g1 MSMg01no155_l02.g1 CHROMAT_FILE:
MSMg01no155_l02.g1 PHD_FILE: MSMg01no155_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:39 2005
(517 letters)
>mm_chr10_48993271_48994185
Length = 915
Score = 739 bits (382), Expect = 0.0
Identities = 450/474 (94%), Gaps = 8/474 (1%)
Strand = Plus / Minus
Query: 1 agagaagaaaccataatctgaacatagtgtatgaaaaaaatctattttcaataaaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agagaagaaaccataatctgaacatagtgtatgaaaaaaatctattttcaataaaaggag 410
Query: 61 ataatgtgaaaaaaagcaaaaacaaaaagacaaaagaaaaaactcattttctagtgtggc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 409 ataatgtgaaaaaaggcaaaaacaaaaagacaaaagaaaaaactcattttctaatgtggt 350
Query: 121 ttaggcagggctttagggatttttttattaaatgataatgatataaaacaaattaaagga 180
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 349 ttaggcagggctttagggatttttt-attaaatgatcatgatataaaacaaattaaagga 291
Query: 181 atagaaataaaactttggggtagtatggaacaatcatatttaaattacttaaagaatatt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 290 atagaaataaaactttggggtagt-tggaacaatcatatttaaattacttaaagaatatt 232
Query: 241 ttatttatttaaagattacatgtttaagtcaaagtcttctgtattttctttaaaaattat 300
||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 231 ttaatcatttaaagattacatgtttaagacaaactcttctgtattttctttaaaaattat 172
Query: 301 aatttattaataacttcttatagtgtctc-atgtgtgtgtgcatgcacggatgtccat-- 357
||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 171 aatttattaataaatacttatagtgtctgtatgtgtgtgtgcatgcacggatgt--ataa 114
Query: 358 gcacacatgcattatgagctctctgtatgattgttggcagtatgcgcctatgaacgtaaa 417
||||| |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||
Sbjct: 113 gcacaaatgcattatgagctcttt-tatgattgttggcagtatgcacctatgaacataaa 55
Query: 418 actcagaagacgacttgtctggtttttcttaccatatgtgtttctgtgatggaa 471
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 attcagaagacgacttgtctggtttttcttaccatatgtgtttctgtgatggaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 915
Length adjustment: 10
Effective length of query: 507
Effective length of database: 905
Effective search space: 458835
Effective search space used: 458835
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
