Query= MSMg01no155_m13.b1 MSMg01no155_m13.b1 CHROMAT_FILE:
MSMg01no155_m13.b1 PHD_FILE: MSMg01no155_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:45 2005
(228 letters)
>mm_chr10_87233731_87234357
Length = 627
Score = 393 bits (203), Expect = e-114
Identities = 218/223 (97%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 5 gaattcatggcttatccggacacatgtacaggtgggtgggggtggttctccttagtgagc 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaattcatggcttatttggacacatgtacaggtgggtgggggtggttctccttagtgagc 367
Query: 65 tgcaacagtgcagagtgatctatgatgggggagggaagaaatcaggacatgagaaaaggg 124
|||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 366 tgcaacagtgcagagtga-ctatgaagggggagggaagaaatcaggacaagagaaaaggg 308
Query: 125 agcaagtatgacatgctaatgctgacatgcaagagtaaaggcaagacacattttatggat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcaagtatgacatgctaatgctgacatgcaagagtaaaggcaagacacattttatggat 248
Query: 185 atgagtgaatgaagacacttgaattaggaaatatatatcctca 227
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgagtgaatgaagacacttgaattaggaaatatatatcctca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 627
Length adjustment: 9
Effective length of query: 219
Effective length of database: 618
Effective search space: 135342
Effective search space used: 135342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_m13.g1 MSMg01no155_m13.g1 CHROMAT_FILE:
MSMg01no155_m13.g1 PHD_FILE: MSMg01no155_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:46 2005
(333 letters)
>mm_chr10_87088627_87089359
Length = 733
Score = 598 bits (309), Expect = e-175
Identities = 327/333 (98%)
Strand = Plus / Plus
Query: 1 atcatcaatgtacagtccccggcaattgcagttggaccccagctttgccacttgtacaac 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atcatcaatgtacagtccccggcaattgtagttggaccccagctttgccacttgtacaac 260
Query: 61 cttcatcaggttacttgggatcataaagttgtgttaccagcctatgaggcagagctttgc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcatcaagttacttgggatcataaagttgtgttaccagcctatgaggcagagctttgc 320
Query: 121 atacacatgtttactgtgggatgggggcatttgggaggatatggagaccaacaccttaag 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 atacacatgtttactgtgggatgggggcatttgggaggatatggagacgaacaccttaag 380
Query: 181 agatcaaaggtgaactgggatgaccttccaacaaatgagtcaactgatctgcctaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatcaaaggtgaactgggatgaccttccaacaaatgagtcaactgatctgcctaagttt 440
Query: 241 ctgtgaatctggggtgggactttaataatgtccacaatcttaataaggcgatggaatttg 300
||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 441 ctgtgaaactggggtgggactttaataatgtccagaatcttaataaggtgatggaatttg 500
Query: 301 tactgacaattcagtacatgtgggctactcgag 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 tactgacaattcagtacatgtgggctactcgag 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
