Query= MSMg01no157_k01.b1 MSMg01no157_k01.b1 CHROMAT_FILE:
MSMg01no157_k01.b1 PHD_FILE: MSMg01no157_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:00 2005
(291 letters)
>mm_chr10_5599244_5599934
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 agacatttccttgtacactagagacccagttaccaattcttctagtggagttgctcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacatttccttgtacactagagacccagttaccaattcttctagtggagttgctcaaag 260
Query: 61 ctgtcttatcttgccagggggaagcagaaattcttagccacagcttccctgtcattacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctgtcttatcttgccagggggaagcagaaattcttagccacagcttccctggcattacca 320
Query: 121 cttctcctgggagtctgtgtcttttccaagtttcaaccaaggagaacagagagacttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctcctgggagtctgtgtcttttccaagtttcaaccaaggagaacagagagacttact 380
Query: 181 agatattcatgtgttgtgcaaatagcgctgtacaaagaccttgtcttcctttctgttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatattcatgtgttgtgcaaatagcgctgtacaaagaccttgtcttcctttctgttctc 440
Query: 241 tgctgtttttagggcataaacagagcagtttttagacaatacactattacc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgtttttagggcataaacagagcagtttttagacaatacactattacc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no157_k01.g1 MSMg01no157_k01.g1 CHROMAT_FILE:
MSMg01no157_k01.g1 PHD_FILE: MSMg01no157_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:00 2005
(650 letters)
>mm_chr10_5666813_5667866
Length = 1054
Score = 1187 bits (614), Expect = 0.0
Identities = 644/660 (97%), Gaps = 11/660 (1%)
Strand = Plus / Minus
Query: 1 agctaaagtgaagttctcatccctggaccaaataatggtctggatatatcagagtctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agctaaagtgaagttctcatccctggaccaaataatggtctggatatatcagagtctcca 782
Query: 61 tctgaagactttacagtca-------gctaagtttaggttgctataaaatgtccccatga 113
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 781 tctgaagactttacagtcagggtggtgctaagtttaggttgctataaaatgtccccatga 722
Query: 114 agatgtccaagtgggagctgcattcccatggcgacattcct----gtcagtgtgcttcca 169
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 721 agatgtccaagtgggagctgcattcccatggcgacattcctgtcagtcagtgtgcttcca 662
Query: 170 agaaaacaagatctggagtcctttgaacagggataagagatggctgtgagacgtaaggat 229
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 661 agaaaacaagatctggagtcctttgaacagggataagagatggctgtgagatgtaaggat 602
Query: 230 atttcttagcgaggacttggaaataagatttctggggagaactcaggttatgttgtctgg 289
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttcttagagaggacttggaaataagatttctggggagaactcaggttatgttgtctgg 542
Query: 290 gcggactagagccaggcagtggcatgtaggtctgtcaaagaagtttttgcttctgtgatg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcggactagagccaggcagtggcatgtaggtctgtcaaagaagtttttgcttctgtgatg 482
Query: 350 agctgagatgatttttcgtggcagtctaatggatatgaatgcactcttaattattcattt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctgagatgatttttcgtggcagtctaatggatatgaatgcactcttaattattcattt 422
Query: 410 ataaataagatgatcatggaacacttgccatatttctcacagctgaacttagaatgttaa 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataaataagatgatcatggaacacttgccatatttctcacagctgaacttagaatgttaa 362
Query: 470 tgaaattaaaattggaaaacaattctgttgggagagattttattataaacatttattaaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaaattaaaattggaaaacaattctgttgggagagattttattataaacatttattaaa 302
Query: 530 ttagggtaaagcactcttgaaatttttattatattattattttatgatatattattttat 589
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagggtaaagcactcttgaaaattttattatattattattttatgatatattattttat 242
Query: 590 tgtatgtaattataaatatggttacatgaattgcgagacataattttcactgtttttttt 649
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 241 tgtatgtaattataaatatggttacatgaattgtgaggcataattttcactgtttttttt 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1054
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1044
Effective search space: 668160
Effective search space used: 668160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
