Query= MSMg01no165_k17.b1 MSMg01no165_k17.b1 CHROMAT_FILE:
MSMg01no165_k17.b1 PHD_FILE: MSMg01no165_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:55 2005
(535 letters)
>mm_chr10_103517778_103518712
Length = 935
Score = 975 bits (504), Expect = 0.0
Identities = 522/528 (98%), Gaps = 2/528 (0%)
Strand = Plus / Plus
Query: 7 gaattccattatttattacgaaagctgggaaatgtagtgtttcagcagaaaactaccccc 66
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccattatttacaaagaaagctgggaaatgtagtgtttcagcagaaaactaccccc 266
Query: 67 acctgttatagaagtctacaactggtcaaagtggatagaacaaccaactgggtttcccag 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acctgttatagaagtctacaactggtcaaagtggatagaacaaccaactgggtttcccag 326
Query: 127 tccaagttgatatatctagaaaacaagagctatatccgaaggtccgataatatcacagaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tccaagttgatatatctagaaaacaagagctatatccgaaggtccgataatatcacagaa 386
Query: 187 gtgtggaagattaaagagcaagtgaaccagggcttatgatatagtctactatacatggta 246
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgtggaagattaaagagcaaatgaaccagggcttatgatatagtctactatacatggta 446
Query: 247 agaaagctgttcccatggagtctaaaaaatattcacctaaacaaatatgactaacagagt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agaaagctgttcccatggagtctaaaaaatattcacctaaacaaatatgactaacagagt 506
Query: 307 aacaatattaactgatgcaccaatgaagatagtaaaatctcactaaaccaaactctcact 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aacaatattaactgatgcaccaatgaagatagtaaaatctcactaaaccaaactctcact 566
Query: 367 tgaagatctactttatggcaattaattactgagaggagtcttctccgggaacaagtcctt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgaagatctactttatggcaattaattactgagaggagtcttctccgggaacaagtcctt 626
Query: 427 tgcaag-actacatgattcctagtgatcagatcttaaaatgtattcctctcaacattaaa 485
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgcaagta-tacatgattcctagtgatcagatcttaaaatgtattcctctcaacattaaa 685
Query: 486 tgaacttactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 533
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgaacttactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_k17.g1 MSMg01no165_k17.g1 CHROMAT_FILE:
MSMg01no165_k17.g1 PHD_FILE: MSMg01no165_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:55 2005
(674 letters)
>mm_chr10_103555846_103556919
Length = 1074
Score = 1278 bits (661), Expect = 0.0
Identities = 670/673 (99%)
Strand = Plus / Minus
Query: 1 tctgggttttcagatataacacacgaatcacttagatttcatcctatgaaaatagaaata 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tctgggttttcagatgtaacacacgaatcacttagatttcatcctatgaaaatagaaata 814
Query: 61 aaagaggaacaggaatggtagaaaggtaacaggacaaaaaaaattccttgtgatttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 aaagaggaacaggaatggtagaaaggtaacaggacaaaaaaaattccttgtgatttcaaa 754
Query: 121 gagcaaataaagatatctgtgaaataatagaatgtgcttaacaacaaaggaaacattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gagcaaataaagatatctgtgaaataatagaatgtgcttaacaacaaaggaaacattaaa 694
Query: 181 tttaatagcttttcctttattacactaattattccaggtaaaaagggaatatgggtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tttaatagcttttcctttattacactaattattccaggtaaaaagggaatatgggtttcc 634
Query: 241 aacttagcaggaaaatgctatttgatttaatcataatactttgcatatcttatttcatct 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atcttagcaggaaaatgctatttgatttaatcataatactttgcatatcttatttcatct 574
Query: 301 gagtagcagtagtttagtccaatgacttcaaaggttgtttaggtcatgaatatgaaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gagtagcagtagtttagtccaatgacttcaaaggttgtttaggtcatgaatatgaaccag 514
Query: 361 agttctggacctgaaataagaataacaagtctagatacttaggctattgctcaagaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agttctggacctgaaataagaataacaagtctagatacttaggctattgctcaagaaagt 454
Query: 421 ccacagggacaagcctctcttgtcactgattcatgaacataattcatgagtatcctaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccacagggacaagcctctcttgtcactgattcatgaacataattcatgagtatcctaaaa 394
Query: 481 ttaataaatatactcaaggattatttgaatggtaaatgtttctctgaaatttataattct 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 393 ttaataaatatactcaaggattatttgaatggtaaatgtttctccgaaatttataattct 334
Query: 541 caatatagcaataataacaaaaataaagaaataatatactaactggaataaaggaacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caatatagcaataataacaaaaataaagaaataatatactaactggaataaaggaacaat 274
Query: 601 tgttatggtttccaagtattgtaaaagagtaatgatatgtttcacttctgagtaataaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgttatggtttccaagtattgtaaaagagtaatgatatgtttcacttctgagtaataaga 214
Query: 661 gaacaaaggaata 673
|||||||||||||
Sbjct: 213 gaacaaaggaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
