Query= MSMg01no167_k22.b1 MSMg01no167_k22.b1 CHROMAT_FILE:
MSMg01no167_k22.b1 PHD_FILE: MSMg01no167_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:30 2005
(557 letters)
>mm_chr10_94746583_94747539
Length = 957
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%)
Strand = Plus / Minus
Query: 5 gaattcactagactctacgctaatgtttgtttctttcctacactttcaggtctcttcacg 64
||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 453 gaattcactagactcgaggctaatgtttgtttctttcctacacttttaggtctcttcacg 394
Query: 65 cttgggcgatttctgagcattagcaacagtgttctctttgcttctcaaaagccagcttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cttgggcgatttctgagcattagcaacagtgttctctttgcttctcaaaagccagcttgc 334
Query: 125 tttttcccgatagtttacttcaggaattttcattaataatttttcactaactgaagcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttttcccgatagtttacttcaggaattttcattaataatttttcactaactgaagcttg 274
Query: 185 gacacagttagcctaactgcattggctttgtgtgtgtttctgtgatacgtgtgtgcaggg 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gacacagtaagcctaactgcattggctttgtgtgtgtttctgtgatacgtgtgtgcaggg 214
Query: 245 gtatgcacgtgcatatgtgtgtgtgtatacgtatgtatgtacatatatgtgcatatgaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gtatgcacgtgcatatgtgtgtgtgtatacgtatgtatgtacatatatgtgcatatgaag 154
Query: 305 atataaccgcgtatgcatgtgcatgtctatgtgtatagtatgtgtatacatgtgtatatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atataaccgcgtatgcatgtgcatgtctatgtgtatagtatgtgtatacatgtgtatatt 94
Query: 365 tatcctgcataatattctttgagcttggtgcacctgtggttttgtgtccgacctttgggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tatcctgcataatattctttgagcttggtgcacctgtggttttgtgtccgacctttgggg 34
Query: 425 ggagattctcagcattacctcaagcacttctgt 457
|||||||||||||||||||||||||||||||||
Sbjct: 33 ggagattctcagcattacctcaagcacttctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_k22.g1 MSMg01no167_k22.g1 CHROMAT_FILE:
MSMg01no167_k22.g1 PHD_FILE: MSMg01no167_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:31 2005
(541 letters)
>mm_chr10_94565295_94566235
Length = 941
Score = 948 bits (490), Expect = 0.0
Identities = 529/542 (97%), Gaps = 2/542 (0%)
Strand = Plus / Plus
Query: 1 tgcagaagttaaataaactcttatggcaattccagctgagtacagaacaacccatatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagaagttaaataaactcttatggcaattccagctgagtacagaacaacccatatttg 260
Query: 61 gggagcactaaatgatcacacttgacttccattggaaaaatatgaacatactgactgcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagcactaaatgatcacacttgacttccattggaaaaatatgaacatactgactgcca 320
Query: 121 gcatatctgtatcaaaaaatcaaaagattacagcaaaaaagcagtgccaacagccagaac 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatatctctatcaaaaaatcaaaagattacagcaaaaaagcagtgccaacagccagaac 380
Query: 181 aaggaaggactctattccccattcaagtagctgagatagg-tcgtgtctattatgtaatc 239
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 381 aaggaaggactctattccccattcaagtagctgagataggat-gtgtctattatgtaatc 439
Query: 240 cactaataatagtaactgcaaaatgttttgtagtcttcagctgtggttgagttgtgatat 299
||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 440 cactagtaagagtaactgcaaaatgttttgtagtctccagctgtggttgagctgtgatat 499
Query: 300 caagaggtcagccagcatggttcaagtttatataatttgggggatggcttgatagtgaag 359
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 500 caagaggtcagccagcatggttcaggtttatataatttgggggatgggttgatagtgaag 559
Query: 360 accaaatgtccttgaagccaagaaagacatctggagcctcaggatgcaccacccaagagg 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accaaacgtccttgaagccaagaaagacatctggagcctcaggatgcaccacccaagagg 619
Query: 420 ctgggtaaactcagaaaggtaaaattacctcgccctacccccggaaacggaggcagaagt 479
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctggggaaactcagaaaggtaaaattacctcgccctacccccggaaacggaggcagaagt 679
Query: 480 agcattttgagcattctttaggccatctactgatgatggatgctcactacgagttgtgaa 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 680 agcattttgagcattctttaggtcatctactgatgatggatgctcactacgagttgtgaa 739
Query: 540 tt 541
||
Sbjct: 740 tt 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
