Query= MSMg01no168_a02.b1 MSMg01no168_a02.b1 CHROMAT_FILE:
MSMg01no168_a02.b1 PHD_FILE: MSMg01no168_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:55 2005
(406 letters)
>mm_chr10_123085147_123085951
Length = 805
Score = 688 bits (356), Expect = 0.0
Identities = 380/388 (97%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaacaaaaactgcctttccattagtttcttctaccccccttagctacccacac 64
|||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||
Sbjct: 591 gaattctcaacaaaaactgcttttccattagtttcttcta-ccccattagctacccacac 533
Query: 65 ctcttactgtgtccagaatgtcatttacttagatgagtgatggcttggtgacagtgtata 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttttactgtgtccagaatgtcatttacttagatgagtgatggcttggtgacagtgtata 473
Query: 125 cttcctgttcagtggcacagatgttcataaaatggtagaacagatgtggttagtggatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cttcctgttcagtggcacagatgttcataaaatggtagaacagatgtggttagtggatgc 413
Query: 185 cagaaactcataatatcatgtcatatgccaacattaagcctgtcttaacatatccaaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cagaaactcataatatcatgtcatatgccaacattaagcctgtcttaacatatccaaaca 353
Query: 245 tgtgaaaatataagttgaggctaactaagtgatccgaatctactcccttgttaatgttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgtgaaaatataagttgaggctaactaagtgatccgaatctactcccttgttaatgttca 293
Query: 305 cttaactgtaagtagtgatgatatgtgtactccactgtgacagaaaatcttgactggtga 364
||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 292 cttaactataagtagtgatggtatgtgtattccactgtgacagcaaatcttgactggtga 233
Query: 365 cacaccttggaagacagaaccccaattg 392
||||||||||||||||||||||||||||
Sbjct: 232 cacaccttggaagacagaaccccaattg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_a02.g1 MSMg01no168_a02.g1 CHROMAT_FILE:
MSMg01no168_a02.g1 PHD_FILE: MSMg01no168_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:55 2005
(166 letters)
>mm_chr10_122952878_122953443
Length = 566
Score = 282 bits (146), Expect = 6e-81
Identities = 161/166 (96%)
Strand = Plus / Plus
Query: 1 catctttttttctcagcccgttattcttttctcaggcttttagcatctaatttacagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctttttttctcagcccgttattcttttctcaggcttttagcatctaatttacagctc 260
Query: 61 tgatatttcagggcaaagttttgttatgaagaaagacagatgagcatatttgctcaatag 120
|| ||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||||
Sbjct: 261 tgttattttagggcaaagttctgttatggagaaagacagacgagcatatttgctcaatag 320
Query: 121 tctagtcaataagagatacagagactctagttcagtgaacgccatg 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctagtcaataagagatacagagactctagttcagtgaacgccatg 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
