Query= MSMg01no169_b03.b1 MSMg01no169_b03.b1 CHROMAT_FILE:
MSMg01no169_b03.b1 PHD_FILE: MSMg01no169_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:40 2005
(130 letters)
>mm_chr10_109312521_109313051
Length = 531
Score = 205 bits (106), Expect = 8e-58
Identities = 112/114 (98%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 15 ggaattcc-agatagtttccatctggggctttttaaaactaaatagcatgaatgaagttc 73
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggaattccaagatagtttccatctggggctttttaaaactaaatagcatgaatgaagttc 269
Query: 74 atttgctttgtaatgtcactgacagctgaaggccattcatgaccatcacttctt 127
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 268 atttgctttgtaatgtcactgacagctgaaggccattcatgactatcacttctt 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 531
Length adjustment: 8
Effective length of query: 122
Effective length of database: 523
Effective search space: 63806
Effective search space used: 63806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no169_b03.g1 MSMg01no169_b03.g1 CHROMAT_FILE:
MSMg01no169_b03.g1 PHD_FILE: MSMg01no169_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:40 2005
(184 letters)
>mm_chr10_109192933_109193516
Length = 584
Score = 340 bits (176), Expect = 2e-98
Identities = 182/184 (98%)
Strand = Plus / Plus
Query: 1 taagctaaaaaagaaactgctgggcaccattagaacatcagagaaccatgtcagtatggc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagctaaaaaagaaactgctgagcaccattagaacatcagagaaccatgtcagtatggc 260
Query: 61 tgaattgatttgggttttaaaaagtgtgctatattttctgacacataaaacatctgctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaattgatttgggttttaaaaagtgtgctatattttctgacacataaaacatctgctta 320
Query: 121 ttataattacttgttcttgtgataagtttaattggaagttagacctcaaataagcaaatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtataattacttgttcttgtgataagtttaattggaagttagacctcaaataagcaaatg 380
Query: 181 tgtg 184
||||
Sbjct: 381 tgtg 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
