Query= MSMg01no174_e19.b1 MSMg01no174_e19.b1 CHROMAT_FILE:
MSMg01no174_e19.b1 PHD_FILE: MSMg01no174_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:08 2005
(315 letters)
>mm_chr10_58935714_58936428
Length = 715
Score = 561 bits (290), Expect = e-164
Identities = 300/304 (98%), Gaps = 2/304 (0%)
Strand = Plus / Plus
Query: 8 ttcagttaatggggcctgtagggtgggattcgcagagttccctggaactaacttcgtgtg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcagttaatggggcctgtagggtgggattcgcagagttccctggaactaacttcgtgtg 267
Query: 68 acagatgatttctgtcccttatgttctctgcacacactgcccgcttttgataacacgaat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acagatgatttctgtcccttatgttctctgcacacactgcccgcttttgataacacgaat 327
Query: 128 gcatcacaaaagtgagatgcaatgacatggttttaacgtcaggaggccaaagaatcatga 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcatcacaaaagtgagatgcaatgacatggttttaacgtcaggaggccaaagaatcatga 387
Query: 188 gttcttcttcaacaacctctttttattttttttttttttattttttacttttttatagct 247
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 388 gttcttcttcaacaacctctttttattttattttttt--attttttacttttttatagct 445
Query: 248 aagaaaattaaactcttgcaagatcatacaacgcccctgaaggttgcagttggatcaaat 307
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 446 aagaaaattaaactcttgcaagatcagacaacgcccctgaaggttgcagttggatcaaat 505
Query: 308 gcaa 311
||||
Sbjct: 506 gcaa 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_e19.g1 MSMg01no174_e19.g1 CHROMAT_FILE:
MSMg01no174_e19.g1 PHD_FILE: MSMg01no174_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:08 2005
(598 letters)
>mm_chr10_59085134_59086134
Length = 1001
Score = 1048 bits (542), Expect = 0.0
Identities = 587/604 (97%), Gaps = 7/604 (1%)
Strand = Plus / Minus
Query: 1 aaaaaa--ccacttgacaggaggaattctgctgcagaatacatgt---agatctgtggct 55
|||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 809 aaaaaattccacttgacaggaggaattctgctgcaggatacatgtaggagatctgtggct 750
Query: 56 gagtcagccaaacct-tagtgatcagacaggtctaatgagagtttcttgtagcatctcct 114
||||||| |||| || ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 749 gagtcagtcaaa-ctatagtgatcagacaggtctagtgagagtttcttgtagcatctcct 691
Query: 115 atcagttacgctagctagtgtgtggttatccttggctatgccagacttggtcttcaacaa 174
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 690 atcagttacgctagctagtatgtggttatccttggctatgccagacttggtctttaacaa 631
Query: 175 tccaaaaggcctaatgatcacagaacagttatcacatctggcactaagctactgggatac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tccaaaaggcctaatgatcacagaacagttatcacatctggcactaagctactgggatac 571
Query: 235 aaagttatgggtgcttgcaaggagacttaagttttacctagatgtttattttcagagaag 294
||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 570 aaagttaggggcgcttgcaaggagacttaagttttacctagacgtttattttcagagaag 511
Query: 295 gttatattccccacccccacttacagaagcacagatggctgggatggcttttgagagagc 354
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 510 gttatattccccacccccacttacagaagcacagatggttgggatggcttttgagagagc 451
Query: 355 ccagggcacgggaaacaggtttatgagaagcgactgctaagcaaggagtcactccactat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 450 ccagggcacgggaaacaggtttatgagaagcgactgctaagcaaggagtcacttcactat 391
Query: 415 ttgggattccattccatgtcagccgggtctttttattactctggacggtgctgagtttca 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttgggattccattccatgtcagccgggtctttttattactctggacggtgctgagtttca 331
Query: 475 tagccatgggagctgaattcttatgtacttaggaggtgtgctatatttgaatacaaaatt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tagccatgggagctgaattcttatgtacttaggaggtgtgctatatttgaatacaaaatt 271
Query: 535 aatagctttggtcactctagagagagacaaaagacttcctagatccaaaagtctagtaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatagctttggtcactctagagagagacaaaagacttcctagatccaaaagtctagtaaa 211
Query: 595 tatc 598
||||
Sbjct: 210 tatc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1001
Length adjustment: 10
Effective length of query: 588
Effective length of database: 991
Effective search space: 582708
Effective search space used: 582708
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
