Query= MSMg01no174_f19.b1 MSMg01no174_f19.b1 CHROMAT_FILE:
MSMg01no174_f19.b1 PHD_FILE: MSMg01no174_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:12 2005
(318 letters)
>mm_chr10_128458565_128459282
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 5 gaattcctggcacctaaaaggtctgcctagaggagcatttacaaatgattcccaaagggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaattcctggcacctaaaaggtctgcctagaggagcatttacaaatgattcccaaagggc 345
Query: 65 taccctgagatgtgaccagcatctatgacctgatttcatgaaggatgactcaaagatggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 taccctgagatgtgaccagcatctatgacctgatttcatgaaggatgactcaaagatggt 285
Query: 125 accagcatctgggacccaactctacaaagaaccatctagattctagatagtatggcagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 accagcatctgggacccaactctacaaagaaccatctagattctagatagtatggcagat 225
Query: 185 atctaagggccttttaaaatctttcctcacgagaggataggtgtccacctggcctgggag 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 224 atctaagggccttttaaaatctttcctcacgagaggataggtgtccacccggcctgggag 165
Query: 245 ggctttgcctgcgcatctgcgggagacatcttggttccaggactccaccgagactagtct 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ggctttgcctgcgcatctgtgggagacatcttggttccaggactccaccgagactagtct 105
Query: 305 gcacaggtgagaat 318
||||||||||||||
Sbjct: 104 gcacaggtgagaat 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_f19.g1 MSMg01no174_f19.g1 CHROMAT_FILE:
MSMg01no174_f19.g1 PHD_FILE: MSMg01no174_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:12 2005
(286 letters)
>mm_chr10_128303274_128303965
Length = 692
Score = 538 bits (278), Expect = e-157
Identities = 286/292 (97%), Gaps = 6/292 (2%)
Strand = Plus / Plus
Query: 1 aaggccagcctggtctacagagtgagttccagggctacacagagaaaccctgtcttgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagcctggtctacagagtgagttccagggctacacagagaaaccctgtcttgaaa 260
Query: 61 aaccaaaaaaccaaaaacaaaacagtgataatgattcatgaaagcttaacaaatgcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccaaaaaaccaaaaacaaaacagtgataatgattcatgaaagcttaacaaatgcagat 320
Query: 121 tacaccttctgacctctttttttctttctttctccttttcctctttttggtaatggtccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaccttctgacctctttttttctttctttctccttttcctctttttggtaatggtccc 380
Query: 181 attttatagcc------tgtcttaaaagttatgatgaccctcattgtactaagtgctaga 234
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttatagccgtggcctgtcttaaaagttatgatgaccctcattgtactaagtgctaga 440
Query: 235 gttataaacatgagctaccccatctagcctgtcctgttctctttcttgttgc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttataaacatgagctaccccatctagcctgtcctgttctctttcttgttgc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 692
Length adjustment: 9
Effective length of query: 277
Effective length of database: 683
Effective search space: 189191
Effective search space used: 189191
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
