Query= MSMg01no178_o24.b1 MSMg01no178_o24.b1 CHROMAT_FILE:
MSMg01no178_o24.b1 PHD_FILE: MSMg01no178_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:49 2005
(669 letters)
>mm_chr10_54833715_54834784
Length = 1070
Score = 1259 bits (651), Expect = 0.0
Identities = 662/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 5 gaattcaacattatgccaataaataatttcaaggaaatggaaaataagtgctcagtagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacattatgccaataaataatttcaaggaaatggaaaataagtgctcagtagaa 264
Query: 65 ttaaaatatgaagaactttgactctagggatgttaacaaaaattcatcaatgttgctaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaaatatgaagaactttgactctagggatgttaacaaaaattcatcaatgttgctaga 324
Query: 125 atataaaaaaaacaagtaataaaataactcaattttagtgctatcatttcaagtttatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atataaaaaaaacaagtaataaaataactcaattttagtgctatcatttcaagtttatta 384
Query: 185 tactttgtggcaaatagcttgataagagtaaattttatgtaggaatacaaagaaaatgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactttgtggcaaatagcttgataagagtaaattttatgtaggaatacaaagaaaatgaa 444
Query: 245 ataaaatttgacaagcatttcagcaggggatgaaaagagagcaataagacagtcttaatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataaaatttgacaagcatttcagcaggggatgaaaagagagcaataagacagtcttaatt 504
Query: 305 aaattcaaaaaacgattgaaattgatgcaagtttctgagttgctaaagaaattatcactt 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaattcaaaaaacgattgaaattaatgcaagtttctgagttgctaaagaaattatcactt 564
Query: 365 ctgtgctggaagtgtagaagggaacaaagtaaagaatattcaagtagttaattatagttc 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgtgctgaaagtgtagaagggaacaaagtaaagaatattcaagtagttaattatagttc 624
Query: 425 attgggttaagtgttcattatttaaggaaaccttagtctaatcatttgtgctatagtgtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attgggttaagtgttcattatttaaggaaaccttagtctaatcatttgtgctatagtgtt 684
Query: 485 ttatttcatctttctgggatacaaagaaagttgaggtgatacaggtgaaagtgaacctgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttatttcatctttctgggatacaaagaaagttgaggtgatacaggtgaaagtgaacctgt 744
Query: 545 gtgaattctctgcttttttgtaatcacagaaattagaaaccattttt-gtgccatttctt 603
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 745 gtgaattctctgcttttttgtaatcacagaaattagaaaccattttttgtgccatttctt 804
Query: 604 tagtcagtgagacctaaaatgaatttagaaacaaaattgcattanagttagatcatcact 663
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 805 tagtcagtgagacctaaaatgaatttagaaacaaaattgcattaaagttagatcatcact 864
Query: 664 attttg 669
||||||
Sbjct: 865 attttg 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space: 698540
Effective search space used: 698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_o24.g1 MSMg01no178_o24.g1 CHROMAT_FILE:
MSMg01no178_o24.g1 PHD_FILE: MSMg01no178_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:50 2005
(508 letters)
>mm_chr10_54991801_54992708
Length = 908
Score = 855 bits (442), Expect = 0.0
Identities = 448/450 (99%)
Strand = Plus / Minus
Query: 59 ttattctgcatggcttgctcaacctgtgtttttatagaacccaggattaccagcttaggg 118
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ttattctgcgtggcttgctcaacctgtgtttttatagaacccaggattaccagcttaggg 849
Query: 119 atgataccacccacaatgggctaggctctcatccaacaatcactgattaaggaaattact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 atgataccacccacaatgggctaggctctcatccaacaatcactgattaaggaaattact 789
Query: 179 tacaactggttcttatggagatattttctcaattgatttcctcctttctgatgcctctaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tacaactggttcttatggagatattttctcaattgatttcctcctttctgatgcctctaa 729
Query: 239 cttgtgtttcattgacataataatattcttcagacctgggagtattagaaaggggaatat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cttgtgtttcattgacataataatattcttcagacctgggagtattagaaaggggaatat 669
Query: 299 gagggtacaaataccctgatcagggcaatggaaaagaatgcagggcattttgggaagaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gagggtacaaataccctgatcagggcaatggaaaagaatgcagggcattttgggaagaga 609
Query: 359 agagaggtcaatgtagaagaatggggagtggatcaagaggagtggaagaatacaaacaac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agagaggtcaatgtagaagaatggggagtggatcaagaggagtggaagaatacaaacaac 549
Query: 419 cttatagaaaaagtgaaaaaggggtatacctgtggagagggaggcaggaagatgataaag 478
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 548 cttatagaaaaagtgaaaaaggggtatacctgtggagagggaggcaggaagaggataaag 489
Query: 479 aggaatgcaaatgttctcataaaggaactg 508
||||||||||||||||||||||||||||||
Sbjct: 488 aggaatgcaaatgttctcataaaggaactg 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
