Query= MSMg01no181_h13.b1 MSMg01no181_h13.b1 CHROMAT_FILE:
MSMg01no181_h13.b1 PHD_FILE: MSMg01no181_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:56 2005
(470 letters)
>mm_chr10_64615083_64615951
Length = 869
Score = 810 bits (419), Expect = 0.0
Identities = 458/471 (97%), Gaps = 3/471 (0%)
Strand = Plus / Minus
Query: 1 tgagagagtatgcccatgcttcttttcacaagaaaacacaaaaggaggagctcagaattc 60
|||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 669 tgagagagtaggtccatgcttcttttcacaagaaaacacaaaaggaggagctcaaaattc 610
Query: 61 tttgctatgagatttttcttttctatatatttctatgtgggatgagaaaactgacaatta 120
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 609 tttgctatgagatttttcttttctatgtatttctatgt-ggatgagaaaactgacaatta 551
Query: 121 -tgaataatgcatgcatgggttattagtcaacctctatgatgcatttatatccatagata 179
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gt-aataatgcatgcatgggttattagtcaacctctatgatgcatttatatccatagata 492
Query: 180 ttatgaaccatggattttattacacgaagtatctctccttgagaaatcatccttctttca 239
||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 491 ttatgaaccatggtttttattacacaaagtatttctccttgagaaatcatccttctttca 432
Query: 240 tggtttccaaattcccactgtgaaatgcaaaagctagtttttaatatgtttttttcttcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 tggtttccaaattcccactgtgaaatgcaaaagctagtttttaatatgttttttttttcc 372
Query: 300 tctctgcacattttagtatggtgccttccatagcaagaaccaattaatcattcttactga 359
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tccctgcacattttagtatggtgccttccatagcaagaaccaattaatcattcttactga 312
Query: 360 ataaaaaaggacaatgggcaagaaaaatgattgtgagcgaaaatgaaacatgtcacaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ataaaaaaggacaatgggcaagaaaaatgattgtgagcgaaaatgaaacatgtcacaata 252
Query: 420 taaaaagatccacagcttaaaatgaaaattgctgaggaaaataaacccaaa 470
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 251 taaaaagatccacagcttaaaatgaaaattgctgaagaaaataaacccaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_h13.g1 MSMg01no181_h13.g1 CHROMAT_FILE:
MSMg01no181_h13.g1 PHD_FILE: MSMg01no181_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:56 2005
(339 letters)
>mm_chr10_64522726_64523464
Length = 739
Score = 557 bits (288), Expect = e-163
Identities = 329/360 (91%), Gaps = 29/360 (8%)
Strand = Plus / Plus
Query: 1 ctcagcttctagagctaagtggggcagagaagaatgaaactagatacctctctcttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 188 ctcagcttctagagctaagtggggcagagaagaatgaaactagatacct-tctcttataa 246
Query: 61 tgctctagttattcaatagcagaaacaagtttaaacaccccaaatgagaaatgaatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgctctagttattcaatagcagaaacaagtttaaacaccccaaatgagaaatgaatcaaa 306
Query: 121 gattcaagctagagaattaaaagtgtttgttgtttttttttttttgtgtgtgtgtgtgtg 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 307 gattcaagctagagaattaaaagtgtttgttgtttttttttt-------gtgtgtgtgtg 359
Query: 181 ttgaaaagaaaaaagaagtttcttatataacattataaaaaaatatttctatctaca--- 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttgaaaagaaaaaagaagtttcttatataacattataaaaaaatatttctatctacaata 419
Query: 238 ------------------taggtaccatactcttttaattctagctacttatggtaagac 279
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 420 tctatttttagcaagacataggtaccatacacttttaattctagctacttatggtaagac 479
Query: 280 aggcagggtacaagctcaatgcaaatctgggctacccagtgaatctaaaatcaccttggg 339
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aggcagggcacaagctcaatgcaaatctgggctacccagtgaatctaaaatcaccttggg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
