Query= MSMg01no182_k06.b1 MSMg01no182_k06.b1 CHROMAT_FILE:
MSMg01no182_k06.b1 PHD_FILE: MSMg01no182_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:26 2005
(600 letters)
>mm_chr10_71747792_71748791
Length = 1000
Score = 1100 bits (569), Expect = 0.0
Identities = 590/601 (98%), Gaps = 8/601 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgaggtgcactctgtcccatacctctctgtggtgacaggtgcaattgttacct 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgaggtggagtctgtcccatacctctctgtggtgacaggtgcaattgttacct 263
Query: 64 ttctgtctttgtaggtgtgctgactcactctgcctccatcttcacagctctttcttattg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttctgtctttgtaggtgtgctgactcactctgcctccatcttcacagctctttcttattg 323
Query: 124 tgctagtgtctttatattgtgcctcctttatatttggatccctgtcatactggattagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgctagtgtctttatattgtgcctcctttatatttggatccctgtcatactggattagga 383
Query: 184 acctttcctctgacacactttcattttaaacttgcaactatcctatttgaaaaaaaaatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctttcctctgacacactttcattttaaacttgcaactatcctatttgaaaaaaaaatt 443
Query: 244 gtgtgtactagggtctggatttcaaattattttcacagagtacatataattcaatctgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtgtactagggtctggatttcaaattattttcacagagtacatataattcaatctgta 503
Query: 304 agagaaatcatttaatttttctgaataaatattcaaatatagaagctgtacatagagttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agagaaatcatttaatttttctgaataaatattcaaatatagaagctgtacatagagttt 563
Query: 364 tcttcccc----gtactgatttaaatatcactgcacaattggagaatatcaagaagcaga 419
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctt----tgttgtactgatttaaatatcactgcacaattggagaatatcaagaagcaga 619
Query: 420 attgaactactatccagggaaagaaaatataaacgtagatgcattcatatctatgtattg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attgaactactatccagggaaagaaaatataaacgtagatgcattcatatctatgtattg 679
Query: 480 atatgttttatggtcatatttaaaattcatacttaatttaaaatataataaaagctagtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atatgttttatggtcatatttaaaattcatacttaatttaaaatataataaaagctagtg 739
Query: 540 ggaaagcatgaatatcttaagaaatgttcctttaattaatgatatatttcttcgtgaccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 740 ggaaagcatgaatatcttaagaaatgttcctttaattaatgatatatttcttcatgaccc 799
Query: 600 a 600
|
Sbjct: 800 a 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_k06.g1 MSMg01no182_k06.g1 CHROMAT_FILE:
MSMg01no182_k06.g1 PHD_FILE: MSMg01no182_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:26 2005
(422 letters)
>mm_chr10_71886697_71887518
Length = 822
Score = 687 bits (355), Expect = 0.0
Identities = 364/367 (99%)
Strand = Plus / Minus
Query: 1 tgtcaacatagctctagaagtactgtagaattacagtgggattaatagttcagaagggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtcaacatagctctagaagtactgtagaattacagtgggattaatagttcagaagggtt 308
Query: 61 ggagtcagaatacgcatagatgtgagaaatctaacctagtcccactttcagagaaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggagtcagaatacgcatagatgtgagaaatctaacctagtcccactttcagagaaagaaa 248
Query: 121 tttcttataaatctattaacagaagacttactgctaaaacagagctggtctgcatctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttcttataaatctattaacagaagacttactgctaaaacagagctggtctgcatctgtt 188
Query: 181 tgagtcagcttctgagtggagcctttcagaggacagtcatgctagactagattctccaga 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 187 tgagtcagcttctgagtggagcctttcagaggacagccatgctagactagattctccaga 128
Query: 241 tctatctagctgtctgcaagtatattagagtatcattaacagcgtcagggattcgtgctt 300
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 127 tctatctagctgtctgcaagtatattagagtatcattaatagtgtcagggattcgtgctt 68
Query: 301 gcccatgagatgggtctcaagtgggtcctgttattggttgctcattctctcagtttctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gcccatgagatgggtctcaagtgggtcctgttattggttgctcattctctcagtttctac 8
Query: 361 tccctac 367
|||||||
Sbjct: 7 tccctac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
