Query= MSMg01no187_f03.b1 MSMg01no187_f03.b1 CHROMAT_FILE:
MSMg01no187_f03.b1 PHD_FILE: MSMg01no187_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:36 2005
(324 letters)
>mm_chr10_57673643_57674366
Length = 724
Score = 574 bits (297), Expect = e-168
Identities = 315/321 (98%)
Strand = Plus / Plus
Query: 4 ggaattctgggactgataataccatgtaaccgactgcacagctcatgcccatgtcattag 63
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 ggaattctgggactggtaataccatgtaaccaactgcacagctcatgcccatgtcattaa 263
Query: 64 tagctcccattaagtcgactgatggcccctgtaaatctgaagttaaacaaactcttcctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagctcccattaagtcgactgatggcccctgtaaatctgaagttaaacaaactcttcctc 323
Query: 124 ctattagtagattcttgtctgcatttgatcataactatgagaaaaattaacagcataata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctattagtagattcttgtctgcatttgatcataactatgagaaaaattaacagcataata 383
Query: 184 gatgtgggcaagaatgtgagaggaaacaattttataaaacactgtggatttttgtcgagc 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 gatgtgggcaagaatgtgagaggaaacaattttataaaacactgtggatttttgccgagt 443
Query: 244 cttgattggtccattgcaagtgacaccacaaagagtctttgtgaggaatgttagatacca 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 cttgattggtccattgcaagtgacaccacaaagagtctttgtgaggtatgttagatacca 503
Query: 304 gccaatagcaggacacttggt 324
|||||||||||||||||||||
Sbjct: 504 gccaatagcaggacacttggt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_f03.g1 MSMg01no187_f03.g1 CHROMAT_FILE:
MSMg01no187_f03.g1 PHD_FILE: MSMg01no187_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:36 2005
(298 letters)
>mm_chr10_57678408_57679106
Length = 699
Score = 555 bits (287), Expect = e-162
Identities = 296/299 (98%), Gaps = 1/299 (0%)
Strand = Plus / Minus
Query: 1 tttcctttggtttggattagccatatatttatgttcacaccaatgagaaaattacaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 499 tttcctttggtttggattagccatatatttatgttcacaccaatgagaaaattacaatat 440
Query: 61 agaagagctggtaatgagaaatggtgacatt-ttttgactacctgtattataggtgattg 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 439 agaagagctggtaatgagaaatggtgacattcttttgactacctgtattataggtgattg 380
Query: 120 gtttggaccaatgaatggagaagaacacaatgatatggacagaagtctcctatggcaggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtttggaccaatgaatggagaagaacacaatgatatggacagaagtctcctatggcaggg 320
Query: 180 ctgcactactttataatgatgacagtagaatcctgtataattcaaggtgggaaatttaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctgcactactttataatgatgacagtagaatcctgtataattcaaggtgggaaatttaga 260
Query: 240 tattattggatcatttctgttatattccaagggaaacaaagtctgactgctttcttttc 298
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 tattattggatcatttctgttatattccaagggaaacaaagtctgactactttcttttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 699
Length adjustment: 9
Effective length of query: 289
Effective length of database: 690
Effective search space: 199410
Effective search space used: 199410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
