Query= MSMg01no189_p01.b1 MSMg01no189_p01.b1 CHROMAT_FILE:
MSMg01no189_p01.b1 PHD_FILE: MSMg01no189_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:02 2005
(325 letters)
>mm_chr10_55141182_55141903
Length = 722
Score = 511 bits (264), Expect = e-149
Identities = 307/322 (95%), Gaps = 5/322 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaggtttcagaaaaaagtgtgaactcagtggtctacatatccttaatgaaactt 64
|||||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||
Sbjct: 205 gaattcaaggtttcagaaaaaattgtgaact-agtggtctacatacccttactgaaactt 263
Query: 65 ccatgaatagaaactgctcaattctttttttttttttaaatcagtgcatggtatggtata 124
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 ccatgaattgaaactgctcaattcttttttttttt--aaatcagtgcatggtatggtata 321
Query: 125 ttagtaacaacttaatactcagtgctacaaatagggtctattaagaacagtatatatcat 184
||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 322 ttagtaacagcttaatactcagtgccacaaatagggtctattaagaacaatatatatcat 381
Query: 185 tctcataaaattaattga-ctaaaaaggaagttaaaaattaaataaaatgttgtagaact 243
|||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctcataaaattaact-atctaacaaggaagttaaaaattaaataaaatgttgtagaact 440
Query: 244 aatgcaactaagatatcatagttaatgtttattatgttcatttgtatcaccaatagttac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgcaactaagatatcatagttaatgtttattatgttcatttgtatcaccaatagttac 500
Query: 304 caaaattaattttaaattcatc 325
||||||||| ||||||||||||
Sbjct: 501 caaaattaagtttaaattcatc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 722
Length adjustment: 9
Effective length of query: 316
Effective length of database: 713
Effective search space: 225308
Effective search space used: 225308
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_p01.g1 MSMg01no189_p01.g1 CHROMAT_FILE:
MSMg01no189_p01.g1 PHD_FILE: MSMg01no189_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:02 2005
(548 letters)
>mm_chr10_55177993_55178940
Length = 948
Score = 791 bits (409), Expect = 0.0
Identities = 412/413 (99%)
Strand = Plus / Minus
Query: 1 aatgcttttcagttttacaagttattaaacatttctcatgttattaatctctcaatgtaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 413 aatgcttttcagttttacaagttattaaacatttctcatgttattaatctttcaatgtaa 354
Query: 61 ttttaactacatcaacatattttcctcacccactcactaacttatttgttgagttcatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttttaactacatcaacatattttcctcacccactcactaacttatttgttgagttcatgc 294
Query: 121 agcctggcttcccatgatcactgagatacttacatatgacagattcagagctatttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agcctggcttcccatgatcactgagatacttacatatgacagattcagagctatttcttc 234
Query: 181 ttgtattatagactgtgtcttaattccttataatccaatctgtatttttattgtgtagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ttgtattatagactgtgtcttaattccttataatccaatctgtatttttattgtgtagct 174
Query: 241 caaatacaacatatttaaaactgagattcaggtatttctttttatacctgctactatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 caaatacaacatatttaaaactgagattcaggtatttctttttatacctgctactatcat 114
Query: 301 tgtttcctcatttttgttaatgaaaactttgtcgttccaaactgtaatatccaattttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tgtttcctcatttttgttaatgaaaactttgtcgttccaaactgtaatatccaattttta 54
Query: 361 ctgttattttgaaagtcatgttttatcatttaaatacaattaggaaagcatca 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ctgttattttgaaagtcatgttttatcatttaaatacaattaggaaagcatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
