Query= MSMg01no192_m05.b1 MSMg01no192_m05.b1 CHROMAT_FILE:
MSMg01no192_m05.b1 PHD_FILE: MSMg01no192_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:35 2005
(418 letters)
>mm_chr10_68110194_68111011
Length = 818
Score = 704 bits (364), Expect = 0.0
Identities = 394/408 (96%), Gaps = 9/408 (2%)
Strand = Plus / Plus
Query: 5 gaattctctatgtccttc-cagaaagtgagtggcaacttgagcaataaggtcttacaatc 63
|||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattctc--tctccttcacagaaagtgagtggcaacttgagcaataaggtcttacaatc 269
Query: 64 tagtaatggcagataatgacaatagtccatattattttggggggacctatggaacctccc 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 270 tagtaatggcagataatgacaatagtccatattattttggggagacctatggaacctccc 329
Query: 124 tgatcagcattttagagcgaaaataaaaaggcttgaagattatgagcattgaaagagaaa 183
||||||||||||||||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 330 tgatcagcattttagagagaaaataaaaaggcttgaagact------attgaaagagaaa 383
Query: 184 gagctgaagaatttaggatattatttttggtggtgatgttttatgcctgatgcctaggct 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagttgaagaatttaggatattatttttggtggtgatgttttatgcctgatgcctaggct 443
Query: 244 gcattgtggaagctgggtggtaggaataccatgttattctttattctagtgattatggtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcattgtggaagctgggtggtaggaataccatgttattctttattctagtgattatggtg 503
Query: 304 aacattttctgtaataaaaagttaaaatgtttccattaattcaaatttgtgtagttacta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacattttctgtaataaaaagttaaaatgtttccattaattcaaatttgtgtagttacta 563
Query: 364 atggcaacaatggggattcctttatcccagaagattttttttgatgtt 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atggcaacaatggggattcctttatcccagaagattttttttgatgtt 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_m05.g1 MSMg01no192_m05.g1 CHROMAT_FILE:
MSMg01no192_m05.g1 PHD_FILE: MSMg01no192_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:35 2005
(383 letters)
>mm_chr10_68161661_68162445
Length = 785
Score = 451 bits (233), Expect = e-131
Identities = 285/305 (93%), Gaps = 6/305 (1%)
Strand = Plus / Minus
Query: 85 cttccttccttccttccttccttccttccttccttcctttctttctttc----tttggtt 140
||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 782 cttccttccttccttccttccttccctcctttcttcctttctttctttctttttttggtt 723
Query: 141 tttcgagacagggtttctctgtatagccctggctgtcctggagctcactttgtagaccag 200
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tatcgagacagggtttctctgtatagccctggctgtcctggagctcactttgtagaccag 663
Query: 201 gctgtccttgaactcagaaatccacctgcctctgcctcccgagtgctgggattaaaggca 260
|||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 662 gctgtcctcgaactcagaaatccacctgcctctgcctcctgagtgctgggatcaaaggcg 603
Query: 261 tgccccaccacgcccagtgttttattttctactacagtgtataagaatggttattcctga 320
||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 602 tgcgccaccactcccggtgttttattttctactgcagtgtataagaatggttattcctga 543
Query: 321 aagccagggaaggtgtttcatggatatg--atctgagaactcgaagagcagaggcaggat 378
|||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||
Sbjct: 542 aagccagggaaggtgtttcatggaaatgtgatctgagaacttgaagagcaggggcaggat 483
Query: 379 gaagg 383
|||||
Sbjct: 482 gaagg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 785
Length adjustment: 9
Effective length of query: 374
Effective length of database: 776
Effective search space: 290224
Effective search space used: 290224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
