Query= MSMg01no207_e16.b1 MSMg01no207_e16.b1 CHROMAT_FILE:
MSMg01no207_e16.b1 PHD_FILE: MSMg01no207_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:03 2005
(421 letters)
>mm_chr10_92879649_92880469
Length = 821
Score = 768 bits (397), Expect = 0.0
Identities = 406/409 (99%)
Strand = Plus / Plus
Query: 12 ggaattccctccttcttcctgctagagtctggtggcggtgctctatttgaaactatatgc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggaattccctccttcttcctgctagagtctggtggcggtgctctatttgaaactatatgc 271
Query: 72 ctcctgcctttgtcattatgtggctttctccccgagtgccaaagtttaatggttttgtat 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctcctgcctttgtcattatgtggctttctccccgagtgccaaagtttaatggttttgtat 331
Query: 132 tttcttttctttcctagacctctccttataaagccaccagtaatactggattaagggtct 191
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttcttttctttcctagatgtctccttataaagccaccagtaatactggattaagggtct 391
Query: 192 attcttgtccagagagatctttaatcttaactacaatctataatcaccctatttccaaat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attcttgtccagagagatctttaatcttaactacaatctataatcaccctatttccaaat 451
Query: 252 aaggaaatatttggaagtaggagtggccaataggttactgcgttttttaaattgcttttt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaggaaatatttggaagtaggagtggccaataggttactgcgttttttaaattgcttttt 511
Query: 312 gtttatttgtttgtttgtttgtttggagacagggtttctctgtgtagccctggctgccct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtttatttgtttgtttgtttgtttggagacagggtttctctgtgtagccctggctgccct 571
Query: 372 gtaactcactctgtagaccagcagagatccacctggctctgcctcctga 420
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggaactcactctgtagaccagcagagatccacctggctctgcctcctga 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_e16.g1 MSMg01no207_e16.g1 CHROMAT_FILE:
MSMg01no207_e16.g1 PHD_FILE: MSMg01no207_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:03 2005
(408 letters)
>mm_chr10_92931093_92931900
Length = 808
Score = 754 bits (390), Expect = 0.0
Identities = 400/404 (99%), Gaps = 2/404 (0%)
Strand = Plus / Minus
Query: 1 taggaagggtatgtctgaccaacctcagaaaattcattagcagatttctccacctgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taggaagggtatgtctgaccaacctcagaaaattcattagcagatttctccacctgctct 445
Query: 61 ttctcggaccacaccagagttcttgggccaatttgtctgcaaaatgcaaaagcttcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttctcggaccacaccagagttcttgggccaatttgtctgcaaaatgcaaaagcttcatga 385
Query: 121 gagaaattccacccaaattactcatctgggtctaagaagaacctagacgttttgtagtaa 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagaaattccagtcaaattactcatctgggtctaagaagaacctagacgttttgtagtaa 325
Query: 181 caaaagcttgtaaagtaagatgggattggttgtgcactggcagggagggaggaggccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaaagcttgtaaagtaagatgggattggttgtgcactggcagggagggaggaggccaaa 265
Query: 241 tcatttaaggtatctaatctgctgttaaacacacagcaagaactctccacagaggcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcatttaaggtatctaatctgctgttaaacacacagcaagaactctccacagaggcacag 205
Query: 301 tgccaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgccaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaa 145
Query: 361 ggaaaggaaaggaaaggaaaggaaaggaaa--ggaaaggaaagg 402
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 144 ggaaaggaaaggaaaggaaaggaaaggaaaggggaaaggaaagg 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
