Query= MSMg01no207_m08.b1 MSMg01no207_m08.b1 CHROMAT_FILE:
MSMg01no207_m08.b1 PHD_FILE: MSMg01no207_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:07 2005
(430 letters)
>mm_chr10_87551056_87551886
Length = 831
Score = 774 bits (400), Expect = 0.0
Identities = 412/416 (99%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 17 gaattctttaa-caaaaaagtaaaaagtaaatacctatctatagatgaaaaaaattaaat 75
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctttaaacaaaaaagtaaaaagtaaatacctatctatagatgaaaaaaattaaat 276
Query: 76 cctatcaagagaatcccacacccaaatagatcaacagtaaaggaataggctctctctcat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cctatcaagagaatcccacacccaaatagatcaacagtaaaggaataggctctctctcat 336
Query: 136 tacatcttatgaaattattatcatctaatgtcaaactcagacaaattcaatattaaaaag 195
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tacatcttatgaaattattataatctaatgtcaaactcagacaaattcaatattaaaaag 396
Query: 196 agaacgtataaatcacattcatggtaataatttaatattactgaatgaaatatttccaag 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agaacgtataaatcacattcatggtaataatttaatattactgaatgaaatatttccaag 456
Query: 256 ttgaatataaataaaagatttgttttacaggcatatgaaaacttcaatactagaaacaat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttgaatataaataaaagatttgttttacaggcatatgaaaacttcaatactagaaacaat 516
Query: 316 ctattagcttactaaaaactaaagaaaattatatctac-atttctaaaatacatatagta 374
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 517 ctattagcttactaaaaactaaagaaaattatatc-accatttctaaaatacatatagta 575
Query: 375 ttaagtattcaataaaatccaacaaatggtggtaaagctatcagtaaggcagaaat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttaagtattcaataaaatccaacaaatggtggtaaagctatcagtaaggcagaaat 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_m08.g1 MSMg01no207_m08.g1 CHROMAT_FILE:
MSMg01no207_m08.g1 PHD_FILE: MSMg01no207_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:07 2005
(658 letters)
>mm_chr10_87623384_87624441
Length = 1058
Score = 1251 bits (647), Expect = 0.0
Identities = 653/655 (99%)
Strand = Plus / Minus
Query: 4 aggtgcattcagtgactttatgttcacagtaccgttaacccagagggaccataggctgca 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 858 aggtgcattcagtgactttatgttcacagtaccgttaaaccagagggaccataggctgca 799
Query: 64 ctgagaacctgacaggctttaggacttgtcagatactacagccccaggcagcgctggtgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 798 ctgagaacctgacaggctttaggacttgtcagatactacagccccaggcagtgctggtgc 739
Query: 124 atttcatcttactagtttactagtgagcattaactgatatgagatatgatataatatgtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atttcatcttactagtttactagtgagcattaactgatatgagatatgatataatatgtc 679
Query: 184 tgtgatatgagaaatgacttcacagtatgacagcagccctgtggtagcctaccgagcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgtgatatgagaaatgacttcacagtatgacagcagccctgtggtagcctaccgagcttg 619
Query: 244 cccaatgtgggagactttgatccaatggtgtatatgtgctgataaatattcaatctaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cccaatgtgggagactttgatccaatggtgtatatgtgctgataaatattcaatctaaaa 559
Query: 304 aaagagggcacgaggtacataggaagaagcaagagagcatcccgtaattggatggaaact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaagagggcacgaggtacataggaagaagcaagagagcatcccgtaattggatggaaact 499
Query: 364 ttattggttttggaactcaagattgggacgtttctacaccttaaataaagcagacttcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttattggttttggaactcaagattgggacgtttctacaccttaaataaagcagacttcat 439
Query: 424 ttccagcattttgtagaggctatacagaagctataatgacttaatttttaaaatgtttat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttccagcattttgtagaggctatacagaagctataatgacttaatttttaaaatgtttat 379
Query: 484 caaaaaacgagaaaagaaaaatgtggctggaacacaagcaacctacctgcaggtgtggtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaaaaacgagaaaagaaaaatgtggctggaacacaagcaacctacctgcaggtgtggtc 319
Query: 544 gtcactcacgcttgcgagctcctggccttctttgggatggaacaccagatcattaatgaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtcactcacgcttgcgagctcctggccttctttgggatggaacaccagatcattaatgaa 259
Query: 604 gtctgagtggccctccaaaacctgtgagagaggagggctggtaagcaagaatgga 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtctgagtggccctccaaaacctgtgagagaggagggctggtaagcaagaatgga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
