Query= MSMg01no215_a23.b1 MSMg01no215_a23.b1 CHROMAT_FILE:
MSMg01no215_a23.b1 PHD_FILE: MSMg01no215_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:36 2005
(120 letters)
>mm_chr10_74127877_74128397
Length = 521
Score = 211 bits (109), Expect = 1e-59
Identities = 115/117 (98%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 5 ggaattcaagtccgttgtattaagtggaataaaccagacatagaaa-aagggccatgttt 63
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ggaattcaagtccgttgtattaagtggaataaaccagacatagaaacaagggccatgttt 262
Query: 64 cctcacttacttacctcaggaaaggactaggttttcctcatagacaaagagacaaaa 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcacttacttaccttaggaaaggactaggttttcctcatagacaaagagacaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 521
Length adjustment: 8
Effective length of query: 112
Effective length of database: 513
Effective search space: 57456
Effective search space used: 57456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_a23.g1 MSMg01no215_a23.g1 CHROMAT_FILE:
MSMg01no215_a23.g1 PHD_FILE: MSMg01no215_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:36 2005
(344 letters)
>mm_chr10_74035358_74036101
Length = 744
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Plus
Query: 1 aaaatcaatatattgttattgaaaataaacacgaaactaaactcactttatctctcaaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 aaaatcaatatattgttattgaaaataaacacgaaactaaactcactttatctctcaagg 260
Query: 61 agaatgctcacactggggtttttctcttatcttaatgtccactgagtgcagaaatagatt 120
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 261 agaatgctcacactggggtttttctcttatctgaatgtctactgagtgcagaaatagatt 320
Query: 121 tgtttttatacagataaaaagaacagaattcatttgaaagcatctcggaaggtcttaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttttatacagataaaaagaacagaattcatttgaaagcatctcggaaggtcttaaat 380
Query: 181 tagtccttattttgattacatcattataatggagaagagaactcacaaggtaaaaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtccttattttgattacatcattataatggagaagagaactcacaaggtaaaaatgtt 440
Query: 241 tattttatgaaataatttgcaagaaaagaaaaattaaacattttaattactatacagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattttatgaaataatttgcaagaaaagaaaaattaaacattttaattactatacagtgt 500
Query: 301 tggggtctgggaatgctgtaaaaactgagatcagataccaatct 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggggtctgggaatgctgtaaaaactgagatcagataccaatct 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
