Query= MSMg01no217_b14.b1 MSMg01no217_b14.b1 CHROMAT_FILE:
MSMg01no217_b14.b1 PHD_FILE: MSMg01no217_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:25 2005
(268 letters)
>mm_chr10_63985826_63986493
Length = 668
Score = 518 bits (268), Expect = e-151
Identities = 268/268 (100%)
Strand = Plus / Plus
Query: 1 ttcaaggtgagaaagatattcattcaaggtgagaaaggtatttatcaacttacaggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcaaggtgagaaagatattcattcaaggtgagaaaggtatttatcaacttacaggattt 260
Query: 61 gcctaaggatgacttgtgaactcttcctactagatagttcttaataaggactaaaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctaaggatgacttgtgaactcttcctactagatagttcttaataaggactaaaggagt 320
Query: 121 catcaagttcagagggaacaattttagtagacaatttgatgtttatgggaagaagtaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcaagttcagagggaacaattttagtagacaatttgatgtttatgggaagaagtaccc 380
Query: 181 agactcattatagtggcagggcttagctaaccactgaccttagtggctacactgggcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactcattatagtggcagggcttagctaaccactgaccttagtggctacactgggcatg 440
Query: 241 tattgtggatggctgatgaaatgttggg 268
||||||||||||||||||||||||||||
Sbjct: 441 tattgtggatggctgatgaaatgttggg 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no217_b14.g1 MSMg01no217_b14.g1 CHROMAT_FILE:
MSMg01no217_b14.g1 PHD_FILE: MSMg01no217_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:25 2005
(369 letters)
>mm_chr10_64077668_64078436
Length = 769
Score = 636 bits (329), Expect = 0.0
Identities = 356/379 (93%), Gaps = 22/379 (5%)
Strand = Plus / Minus
Query: 1 taaggaattcacagatatttggtgacttgcatattattaatttcagttttatgagaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 taaggaattcacagatatttggtgacttgcatattattaatttcagttttatgagaattt 320
Query: 61 agcccacaattttgcagtctatgagacaatcacttttgtaatagccatttttgtataagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agcccacaattttgcagtctatgagacaatcacttttgtaatagccatttttgtataagt 260
Query: 121 accacaaaggagatactctgtgtcaaaatggtaaagaactgttacttaggaaagtttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 accacaaaggagatactctgtgtcaaaatggtaaagaactgttacttaggaaagtttggg 200
Query: 181 agagaaaaagagaa----------------------agagagagagagagagagcatgag 218
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 199 agagaaaaagagaaagagagagagagagagagagagagagagagagagagagagcatgag 140
Query: 219 cgagggagagagtgcatttgtttgaggttttaagaggtagaatttcaataaacaataatg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cgagggagagagtgcatttgtttgaggttttaagaggtagaatttcaataaacaataatg 80
Query: 279 ataacatgaacagagagaatagttcactatgctcagtaggtgactcggtctgaaaggaac 338
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aaaacatgaacagagagaatagttcactatgctcagtaggtgactcggtctgaaaggaac 20
Query: 339 cagatcaatgacttagatt 357
|||||||||||||||||||
Sbjct: 19 cagatcaatgacttagatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
