Query= MSMg01no217_g21.b1 MSMg01no217_g21.b1 CHROMAT_FILE:
MSMg01no217_g21.b1 PHD_FILE: MSMg01no217_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:58 2005
(415 letters)
>mm_chr10_103561627_103562441
Length = 815
Score = 708 bits (366), Expect = 0.0
Identities = 399/410 (97%), Gaps = 2/410 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctgaac-aaaagagaactcttttgagatgtcagagttacagaacagctgaag 62
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 612 ggaattctctgaacaaaaagagaactcttttgagatgtcagagtcacagaacagctgaag 553
Query: 63 agattaatggtcaacctaaggacattgcagttgtagttgctgcaaaggaggagcaagtcc 122
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 552 agattaatggtcaacctaaggacattgtagttgtagttgctgcagaggaggagcaagtcc 493
Query: 123 attgcaaagtttcatgcaccacatatatgtagtaaaatatcacctattctttttccaaat 182
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 492 attgcaaagtttcatgcagaaaatatatgtagtaaaatatcacctattctttttccaaat 433
Query: 183 gaaaagaggtagttttcagagactaactatacatgagtcactatcatattcaggattaga 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 432 gaaaagaggtagttttcagagactaactatacatgagtcactatcatattcaggattata 373
Query: 243 tgtcataatgaacattaattttctaatgtttaatgtctttgtaaatgcctgatttttgtc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtcataatgaacattaattttctaatgtttaatgtctttgtaaatgcctgatttttgtc 313
Query: 303 aggcaatgctctgaaatcacctcttgtataaatctcgccagagtaaacaaaatggaaagt 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggcaatgctctgaaatcacctcttgtataaatctcgccagagtaaacaaaatggaaagc 253
Query: 363 tcatccattgatttatactaaaacaataaatcctttagtgatgagatcta 412
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aca-ccattgatttatactaaaacaataaatcctttagtgatgagatcta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_g21.g1 MSMg01no217_g21.g1 CHROMAT_FILE:
MSMg01no217_g21.g1 PHD_FILE: MSMg01no217_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:58 2005
(181 letters)
>mm_chr10_103502469_103503049
Length = 581
Score = 335 bits (173), Expect = 1e-96
Identities = 179/181 (98%)
Strand = Plus / Plus
Query: 1 aggatggtcatgacctaggtacaaagcatacaaaataatatatggtagcacaaaagcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatggtcatgacctaggtacaaagcatacaaaataatatatggtagcacaaaagcccc 260
Query: 61 tcacgtattgggaattatggaatttagtataggaatatgttactgctgactccagaaata 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 261 tcacgtattgggaattatggaatttagtacaggaatatgttactgctgactccggaaata 320
Query: 121 gaaaaatttgagtgagtaccaataggataatatatgttagtaattacaaatttgtagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaaatttgagtgagtaccaataggataatatatgttagtaattacaaatttgtagctg 380
Query: 181 g 181
|
Sbjct: 381 g 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
