Query= MSMg01no233_i18.b1 MSMg01no233_i18.b1 CHROMAT_FILE:
MSMg01no233_i18.b1 PHD_FILE: MSMg01no233_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:16 2005
(703 letters)
>mm_chr10_52687073_52688175
Length = 1103
Score = 1307 bits (676), Expect = 0.0
Identities = 693/699 (99%)
Strand = Plus / Minus
Query: 5 gaattccttaaggattgttttctctagggagtgctgacccaaacagaaggaaaacattgg 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 903 gaattccttaaggattgttttctctggggagtgctgacccaaacagaaggaaaacattgg 844
Query: 65 ccctggcccccaaaattttaatgtgcctctggttataagaaggagtgtataaatatataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ccctggcccccaaaattttaatgtgcctctggttataagaaggagtgtataaatatataa 784
Query: 125 cttggcaaatacttagtttaatctttagaacagggatgaataaatttagtcacgtacctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cttggcaaatacttagtttaatctttagaacagggatgaataaatttagtcacgtacctt 724
Query: 185 ctgcatttaaaaaatttattagtttttcttaagcacagacatagcattttgcttgtggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ctgcatttaaaaaatttattagtttttcttaagcacagacatagcattttgcttgtggcc 664
Query: 245 cctgtgaaaatatcccctcaatgagaatgttccaaactgctttacctaagttaggttgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cctgtgaaaatatcccctcaatgagaatgttccaaactgctttacctaagttaggttgta 604
Query: 305 agagagttgagctgctaaaccaccatgggcgaatctgattattggtcagccatagacctg 364
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 603 agagagttgagctgcaaaaccaccatgggtgaatctgattattggtcagccatagacctg 544
Query: 365 ggtctctagcacagaaatctactctcagatcaactgaaataaccttatatctgtcctgag 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtctctagtacagaaatctactctcagatcaactgaaataaccttatatctgtcctgag 484
Query: 425 accatctgggtctcttggcagatattatcagtctcctgtacttgattatggctagaaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 accatctgggtctcttggcagatattatcagtctcctgtacttgattatggctagaaaga 424
Query: 485 aacaaacttcttgccctctattaaaaccatgtatctgttgttgtttttattcatacacct 544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aacaaacttcttgccctgtattaaaaccatgtatctgttgttgtttttattcatacacct 364
Query: 545 tcccttaaactgcttataattcatatacctttaaacaaggtcccattagaaagatacatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcccttaaactgcttataattcatatacctttaaacaaggtcccattagaaagatacatt 304
Query: 605 atgataagattcacttgcaatttanacataacctttacaaaaaataaattccttacatag 664
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 atgataagattcacttgcaatttaaacataacctttacaaaaaataaattccttacatag 244
Query: 665 gatggtcagctgaactatatccaaattgcaaagctatga 703
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gatggtcagctgaactatatccaaattgcaaagctatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no233_i18.g1 MSMg01no233_i18.g1 CHROMAT_FILE:
MSMg01no233_i18.g1 PHD_FILE: MSMg01no233_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:16 2005
(366 letters)
>mm_chr10_52603686_52604450
Length = 765
Score = 646 bits (334), Expect = 0.0
Identities = 352/358 (98%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 10 aacaacaacaacaacaaaaagacaacgactctcaaaaacatcagcagtaccaggaggcct 69
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aacaataacaacaacaaaaagacaacgactctcaaaaacatcagcagtaccaggaggcct 269
Query: 70 ttgtgtgtcattttaaatgtgtatagatagaactagcttggatgtatgagtggaaggaag 129
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tt-tgtgtcattttaaatgtgtatagatagaactagcttggatgtatgagtggaaggaag 328
Query: 130 acattactagacactctatgctcaggagcacttgtctccctggaacactgcttctttttc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acattactagacactctatgctcaggagcacttgtctccctggaacactgcttctttttc 388
Query: 190 agtaccgggctttcaccagagcaggctggacaattgggaaataggaaatggaaaagccca 249
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtaccgtgctttcaccagagcaggctggacaattgggaaataggaaatggaaaagccca 448
Query: 250 tttatgacatactttcttcatgctaaaaactaccaaccaactactacctatttaattttt 309
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 449 tttatgacatactttcttcatgctaaaaactacca-ccaactactacctatttaattttt 507
Query: 310 tt-cttagcaaacaaaaatgaaggaatgagtttatcttatatttcagtgacattttac 366
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 508 tttcttagcaaacaaaaatgaaggaatgagtttagcttatatttcagtgacattttac 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
