Query= MSMg01no233_p22.b1 MSMg01no233_p22.b1 CHROMAT_FILE:
MSMg01no233_p22.b1 PHD_FILE: MSMg01no233_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:50 2005
(371 letters)
>mm_chr10_98697267_98698037
Length = 771
Score = 688 bits (356), Expect = 0.0
Identities = 365/368 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttcttctttcctgtttcagatgcttcctctagcagatgatcttcccttatgt 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatcctttcttctttcctgtttcagatgcttcctctagcagatgatcttcccttatgt 263
Query: 64 ttccatgactccagccgtgaggcactgatgcaggatggagctgactttcactggataccc 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 ttccatgactccagccgtgaggcattgatgcaggatggagctgactttcactggataccc 323
Query: 124 atcacatgcccagcatcttaacaagtgtctttgcttatgttatttcattcacacttgtag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcacatgcccagcatcttaacaagtgtctttgcttatgttatttcattcacacttgtag 383
Query: 184 gactccccgtggatgtcatctgaaatccagggaggtttttaaaagtgcccaggatcacaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 gactccccgtggatgtcatctgaaatccagggaggtttttaaaagtgcccgggatcacaa 443
Query: 244 agctagtaattggtgagtttaaactggatcccacacctaccggatttcaaagcatgatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agctagtaattggtgagtttaaactggatcccacacctaccggatttcaaagcatgatct 503
Query: 304 gtttattatgttagatatgatgttagatattagttattgagaactatgaagcacgagtgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtttattatgttagatatgatgttagatattagttattgagaactatgaagcacgagtgt 563
Query: 364 tacttgtg 371
||||||||
Sbjct: 564 tacttgtg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_p22.g1 MSMg01no233_p22.g1 CHROMAT_FILE:
MSMg01no233_p22.g1 PHD_FILE: MSMg01no233_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:50 2005
(287 letters)
>mm_chr10_98870366_98871053
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 ttagtttaaaaggaagcacataattgtgagcactgacaggttgccatatctgtttcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttagtttaaaaggaagcacataattgtgagcactgacaggttgccatatctgtttcagtt 429
Query: 61 ttctaccctcgccactgagtaggatgctgcaggagtacttgagatgcctatcattaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttctaccctcgccactgagtaggatgctgcaggagtacttgagatgcctatcattaccta 369
Query: 121 atgttcacacccacttcaaagagacctgcttaggccaaatggcacccatttcctaccgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgttcacacccacttcaaagagacctgcttaggccaaatggcacccatttcctaccgta 309
Query: 181 atgc-aaaaaaaatagctaccctacgaagagctcactcataatttaaggaaattggactt 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atgcaaaaaaaaatagctaccctacgaagagctcactcataatttaaggaaattggactt 249
Query: 240 ctctggcctggaggtccagaaattagccttattaattgagatattaaa 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctctggcctggaggtccagaaattagccttattaattgagatattaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
