CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAATGTATTCCCTCTTCAGCTGGCAGAATCACACTCCTGCCAGAG
CACAAGACAAATCATACTCGGCTGCTACGGACAATCTGAAGCATCCCATA
CCCCACACCAGGAGTTAAAACAGAAACATATTCACATAACATGGCTGCTT
TTTTTTTTTTTAAAGAAACCACAATACTCACTACAAATAGAGAATAAAAC
TTGGAGGACAAACAGGACAGGGGATGTTGTTGTTTTACCTTTAAGTAAGA
AGTCAGTGAAAACTCACTGTAATGATGACCCCAAAGAGGCAAATACATTC
CCCTGTGAGGTATTTGCCCTGGCTCTACATAAGGAACTTTCTCTCCTAGG
TGATAGCCCTGTTTCCCTCCTCTTTCTCCGGGCCATCACTAGATCTCCCT
CCTCCACAGTGTGGAATCCCACTTGGTCCTGTTGAGCCATCTCGGTAACT
GAAGGGGGAGTGTTGATAATTCCTACAGTAATAGAGGTTTGTCTGTTACT
ATGCTGCTTTATCAGTTCTTAGATATTTTCAAATTTACTATATATGTTCA
ATCTCTGGATTAACTCGTTTTCTACGAATGTGGGACTCTGATAGCAACTT
ACTATTATGACTATTTATGGCACTCTACAGAAGTTTTCAGTTAGTGCCTC
CCGATATATTTTACCCTCTACA

TTTTTCNCTTTCTCCNTTTNTCTCGTTTCTTTCATAATTTNNNNTTAGTA
TGATAGGGGAAGCCTGGCGGCGCCTGGGTTCCGGAGAAGNNNGANNNANA
GNAAGTTNCAAAAAAGGGGGGNNGNGGGGGANNNGGNNGNGNGNNGGGAG
NNCGGATTTTTACCAAAAAAGAGGGGGGGGANNGGAAAGGGGGNAAAGAA
AGGGGAGAAAAAAGAAAAAGAGGAGNANGGAAGGAGNNAAAAAAGAGAGG
AGAAGAAAGAAAGGGAAAAGGANNCGGAAGAAAGAGGAAGGGGTTTAGAG
GGAGAGAAGAANANNGGGAGGGAGAGGTGGGGAAGATATACAGAGTGAGA
AAAAAAGTATTTAGTATTATGAAAAAAGAAGAAAAAGAGGAAGGAAGGTA
TTTTTTATTACCCGCCCACGGCGAATGAGAAATTGGGTAACAGTTTTGGT
GGGACTGTCTGAAAAAAAAAAAAAAAAAAAAAGGGGTTAGATAGGGGGTA
AAAAATATGTTAAAAGAATAGGAGACGAGAAAATCGGGGGGTAAAAGGAG
AGGGAATAAATAGAAGAAAAAAAAGGAAGAGATGTGTGAAGGGAAGAGTG
AAAAAAGAAAGAGAGAGAGAAAAGATATAGAGATCCCAGAAAGAGAGAGA
GAAAGAATAGTTAATGAAGAAAGGAGATAATATATAAGAAAGCCAAAGAG
GGGATAATTATAAAAAAAAAAAAAGAAGAGAATAGTAAGGAAGAGAAAAA
AGATAGAAATGAGAAAAAAATAAAGG

Query= MSMg01no236_l13.b1 MSMg01no236_l13.b1 CHROMAT_FILE:
MSMg01no236_l13.b1 PHD_FILE: MSMg01no236_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:21 2005
         (581 letters)



>mm_chr10_4968325_4969305
          Length = 981

 Score =  971 bits (502), Expect = 0.0
 Identities = 562/588 (95%), Gaps = 12/588 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaaatgtattccctcttcagctggcagaatcacactcctgccagagcacaagac 64
           |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaattccaaatgtaatctatcttcagctggcagaatcacactcctgccagagcacaagac 254

                                                                       
Query: 65  aaatcatactcggctgctacggacaatctgaagcatcccataccccacaccaggagttaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaatcatactcggctgctacggacaatctgaagcatcccataccccacaccaggagttaa 314

                                                                       
Query: 125 aacagaaacatattcacataacatggctgcttttttttttttt----------aaagaaa 174
           |||||||||||||||||||||||||||||||||||||||||||          |||||||
Sbjct: 315 aacagaaacatattcacataacatggctgctttttttttttttttttttttttaaagaaa 374

                                                                       
Query: 175 ccacaatactcactacaaatagagaataaaacttggaggacaaacaggacaggggatgtt 234
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 375 ccacaatactcactacaaatagagaataaaacttggagggcaaacaggacaggggatgtt 434

                                                                       
Query: 235 gttgttttacctttaagtaagaagtcagtgaaaactcactgtaatgatgaccccaaagag 294
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gatgttttacctttaagtaagaagtcagtgaaaactcactgtaatgatgaccccaaagag 494

                                                                       
Query: 295 gcaaatacattcccctgtgaggtatttgccctggctctacataaggaactttctctccta 354
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 495 gcaaatacattcccctgtgaggtatttgccctggctctccataaggaactttctctccta 554

                                                                       
Query: 355 ggtgatagccctgtttccctcctctttctccgggccatcactagatctccctcctccaca 414
           |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 555 ggtgatagccctgtttccctcctctttctctgggccatcactagatctcccttctccaca 614

                                                                       
Query: 415 gtgtggaatcccacttggtcctgttgagccatctcggtaactgaagggggagtgttgata 474
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgtggaatcccacttggtcctgtagagccatctcggtaactgaagggggagtgttgata 674

                                                                       
Query: 475 attcctacagtaatagaggtttgtctgttactatgctgctttatcagttcttagatattt 534
           ||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 675 attcctacagtaatataggtttgtcagttcctatgctgttttatcagttcttagatattt 734

                                                           
Query: 535 tcaaatttactatatatgttcaatctctggattaac-tcgttttctac 581
           ||||||||||||| |||||||||||||||||||||| | |||||||||
Sbjct: 735 tcaaatttactatgtatgttcaatctctggattaacat-gttttctac 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)