MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-260I09
Chromosome	10 (Build37)
Map Location	83,845,863 - 83,846,110
singlet/doublet	singlet
Overlap gene	Nuak1
Upstream gene	LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik, LOC432482
Downstream gene	Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690, Ric8b, Fhl4, AI597468, Mterfd3, Cry1, EG666974
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC666748 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Aldh1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216188 MGI:2444680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230046K03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319277 MGI:2441787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Appl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216190 MGI:2384914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1500009L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69784 MGI:1917034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs

name	LOC100041225 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	C230099D08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320212 MGI:2443595
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC432482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 17 Proteins pseudo : _no_value

name	Nuak1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77976 MGI:1925226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ckap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216197 MGI:2444926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp11l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216198 MGI:2444679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70428 MGI:1917678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfx4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG625690 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625690 MGI:3643042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins

name	Ric8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237422 MGI:2682307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fhl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14202 MGI:1338765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI597468 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103266 MGI:2143652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mterfd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74238 MGI:1921488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cry1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12952 MGI:1270841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666974 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666974 MGI:3647964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 389 ESTs, 7 Proteins

name	Aldh1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956315 GeneID:216188 MGI:2444680
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase 1 family, member L2 transcript_id : NM_153543.1

name	A230046K03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090571 GeneID:319277 MGI:2441787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230046K03 gene transcript_id : NM_001033375.2

name	Appl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803546 GeneID:216190 MGI:2384914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 transcript_id : NM_145220.2

name	1500009L16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388505 GeneID:69784 MGI:1917034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs product : RIKEN cDNA 1500009L16 gene transcript_id : XM_899407.2

name	C230099D08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260972 GeneID:320212 MGI:2443595
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA C230099D08 gene transcript_id : XM_001476017.1

name	Nuak1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138543 GeneID:77976 MGI:1925226
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NUAK family, SNF1-like kinase, 1 transcript_id : NM_001004363.1

name	Ckap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62526117 GeneID:216197 MGI:2444926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoskeleton-associated protein 4 transcript_id : NM_175451.1

name	Tcp11l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130244 GeneID:216198 MGI:2444679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex 11 (mouse) like 2 transcript_id : NM_146008.2

name	Polr3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195738 GeneID:70428 MGI:1917678
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) III (DNA directed) polypeptide B transcript_id : NM_027423.1

name	Rfx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67906190 GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 4 (influences HLA class II expression) transcript_id : NM_001024918.1

name	EG625690 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261075 GeneID:625690 MGI:3643042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : predicted gene, EG625690 transcript_id : XM_894484.3

name	Rfx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892183 GeneID:71137 MGI:1918387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 4 (influences HLA class II expression) transcript_id : NM_027689.3

name	Ric8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34147208 GeneID:237422 MGI:2682307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) transcript_id : NM_183172.1

name	Ric8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61806724 GeneID:237422 MGI:2682307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) transcript_id : NM_001013441.1

name	Fhl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802955 GeneID:14202 MGI:1338765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : four and a half LIM domains 4 transcript_id : NM_010214.3

name	AI597468 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61557490 GeneID:103266 MGI:2143652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI597468 transcript_id : NM_001013028.1

name	Mterfd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388641 GeneID:74238 MGI:1921488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MTERF domain containing 3 transcript_id : NM_028832.2

name	Cry1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742745 GeneID:12952 MGI:1270841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cryptochrome 1 (photolyase-like) transcript_id : NM_007771.3

name	EG666974 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388525 GeneID:666974 MGI:3647964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 389 ESTs, 7 Proteins product : predicted gene, EG666974, transcript variant 2 transcript_id : XM_001002751.1

name	Aldh1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956316 CCDS:CCDS24077.1 GeneID:216188 MGI:2444680
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0048037 - cofactor binding [Evidence IEA]; GO:0016155 - formyltetrahydrofolate dehydrogenase activity [Evidence IEA]; GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0009258 - 10-formyltetrahydrofolate catabolism [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA]; GO:0006730 - one-carbon compound metabolism [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aldehyde dehydrogenase 1 family, member L2 protein_id : NP_705771.1

name	A230046K03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090572 GeneID:319277 MGI:2441787
definition	codon_start : 1 product : hypothetical protein LOC319277 protein_id : NP_001028547.2

name	Appl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644587 CCDS:CCDS24078.1 GeneID:216190 MGI:2384914
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0010008 - endosome membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS]; GO:0016581 - NuRD complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0017137 - Rab GTPase binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS] codon_start : 1 note : DIP13 beta product : Dip3 beta protein_id : NP_660255.1

name	1500009L16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027529 GeneID:69784 MGI:1917034
definition	codon_start : 1 product : hypothetical protein LOC69784 protein_id : XP_904500.1

name	C230099D08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260973 GeneID:320212 MGI:2443595
definition	codon_start : 1 product : hypothetical protein LOC320212 protein_id : XP_001476067.1

name	Nuak1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138544 CCDS:CCDS24079.1 GeneID:77976 MGI:1925226
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : ZNUAK family, SNF1-like kinase, 1 protein_id : NP_001004363.1

name	Ckap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526118 CCDS:CCDS24080.1 GeneID:216197 MGI:2444926
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytoskeleton-associated protein 4 protein_id : NP_780660.1

name	Tcp11l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122471 GeneID:216198 MGI:2444679
definition	codon_start : 1 product : t-complex 11 (mouse) like 2 protein_id : NP_666120.1

name	Polr3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195739 CCDS:CCDS24081.1 GeneID:70428 MGI:1917678
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : RNA polymerase III subunit RPC2 homolog product : RNA polymerase III subunit RPC2 protein_id : NP_081699.1

name	Rfx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906191 CCDS:CCDS24082.1 GeneID:71137 MGI:1918387
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; winged-helix transcription factor RFX4 product : regulatory factor X, 4 isoform 1 protein_id : NP_001020089.1

name	EG625690 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261076 GeneID:625690 MGI:3643042
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_899577.2

name	Rfx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906189 CCDS:CCDS24083.1 GeneID:71137 MGI:1918387
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; winged-helix transcription factor RFX4 product : regulatory factor X, 4 isoform 2 protein_id : NP_081965.2

name	Ric8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147209 CCDS:CCDS24085.1 GeneID:237422 MGI:2682307
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; resistance to inhibitors of cholinesterase 8B product : resistance to inhibitors of cholinesterase 8B isoform 2 protein_id : NP_898995.1

name	Ric8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61806725 CCDS:CCDS24084.1 GeneID:237422 MGI:2682307
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; resistance to inhibitors of cholinesterase 8B product : resistance to inhibitors of cholinesterase 8B isoform 1 protein_id : NP_001013459.1

name	Fhl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560590 CCDS:CCDS24086.1 GeneID:14202 MGI:1338765
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : four and a half LIM domains 4 protein_id : NP_034344.2

name	AI597468 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61557491 CCDS:CCDS24087.1 GeneID:103266 MGI:2143652
definition	codon_start : 1 product : hypothetical protein LOC103266 protein_id : NP_001013046.1

name	Mterfd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46518496 CCDS:CCDS24088.1 GeneID:74238 MGI:1921488
definition	codon_start : 1 product : transcription termination factor-like protein protein_id : NP_083108.1

name	Cry1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681031 CCDS:CCDS24089.1 GeneID:12952 MGI:1270841
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003913 - DNA photolyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence IDA] [Evidence IMP]; GO:0006281 - DNA repair [Evidence IEA] codon_start : 1 product : cryptochrome 1 (photolyase-like) protein_id : NP_031797.1

name	EG666974 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388526 GeneID:666974 MGI:3647964
definition	codon_start : 1 product : similar to zeta proteasome chain; PSMA5 isoform 2 protein_id : XP_001002751.1

name	LOC666748 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666748
definition	number : 1 pseudo : _no_value

name	LOC100041225 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041225
definition	number : 1 pseudo : _no_value

name	LOC432482 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261069 GeneID:432482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 17 Proteins product : similar to nucleoside diphosphate kinase B pseudo : _no_value transcript_id : XR_034427.1

clone name	MSMg01-384A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-460K24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-179O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-305A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-260I09.T7 (MSMg01no260_i09.b1)	MSMg01-260I09.TJ (MSMg01no260_i09.g1)
ACC	AG403166	AG403167
length	838	778
length of high quality (start - end)	---	250 (87 - 336)
definition	CHROMAT_FILE: MSMg01no260_i09.b1 PHD_FILE: MSMg01no260_i09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:56:39 2005	CHROMAT_FILE: MSMg01no260_i09.g1 PHD_FILE: MSMg01no260_i09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:56:39 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAAATCCGCGGAA TTTATTTTATTTCCCATGTTTTCATCACCTACTGTTGGTATCAGTAACCG ACTTTGCAGATGGCCTCCGACCCCAACATTGGCGGTGATGTCTCCCATAG ATGACAGGGACACATGCTTCTGTTGCCAAGTTAATCATCATACATTCCCA TAATCCACTTGAGTCACCTCCTACCTCTTACCTTCGAGCAGTTATGTCTC AATCCAAAAGAAAAGTTAATCCTCCTAACCTCCTACATCTCTTTCCCCTT AGCCTTTGTAGTAACCTTTAGACTCCTTCCCCCGAGAGAAATCGCCCTTA TAGAACAGAATTAGTTAAGGTGAGGCCTACTCTAGATAGATTGTCTTCTT TCTTCCTCTACACCTCCAACCATCAACTTGGCATTATCAACAATATAAGA TATATATCATAATATATTATTCTCTCATGATTACTAGTTTATACGTCATC TACTTATCTCTATATATCACTTGATCCTTTTGTCCAATTCTTAGTCTTCT ACGTACTAAGTCAAGCTAATTTAGGTCTATTTATCCATCTTTTAGTTACC TTCTACGATGTTTAGAGATTAATGGGAACGATTAGTATGATTTAGAGTAC ATATTGTGTACTGTAATTTCATCATCTTCCCCAATATTTCAATTATTGAA TCCATACTCTTTGCATACCTGTACATCCTCGCAATCAACTCGTTTAATAT AGTGAGCAGTGTTAGTGGTGTCATTACTATTATTAAAATTTTGTTAACTT GGACTTCAAATCACGACATATTATTTTCATTACAATGN	TCCCCTTTCTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGCGGTTGAGTG CAATCTGAGAGGGGGGTGGGGGATGCCTTCTCGGAGGGTGGCTGTGCACA GCTGCCTTGAATGACATTCCATTCATCCAAGGATGGCTCCTTTTTTAAAA ACAAAAATAGGCTTATTCTAGGGGCTTCATTCAAAACAGCTTCTGTGGGT CTCAGCACCCGAGGCTCCCCAGCCCTGTGGATAGCCCCAGCTCCTTGCTA ATGCTCAAGTGCAAATCAGGCTGGAGATGGTAGATCTCACAGCGTGTTCA CCTTACAAGGTTGGCTAATACTGACTGAAATCCACAGACCCTCCCGGGGC TGTGTGTGTCTGGCGCTGGAAGCGCGACCCCTGCACACTTGTATGGCTGC CCAGTGGTCACATTTCTTTATATGATCAAATCCTACTCCCTAAATCTGTC TCCTCTGTTCGGCAACTGTATTTCTTAAAGTCCCGTGCCAAAATTGTCAT ATAATTACATTGATTATTTTGAGCATTATCAAGATTTATATCCAACTTTA TTTTATGTCGTCCCCACCTACACCCGGTTATTATAGCTCTATCCATATTT TTCCCTCTCTGTACCTTACACGCTTTTTTTTATCCACATTATTTCGCCAC CTATATTATATNTCCCTCTCCCCTCTGTTTTGTAACTCCGCTTTACTATC TGCCTCATTATCCCCGTCCTATATTACG
quality values	Open. Hide. 6 6 6 6 6 10 10 18 16 13 8 10 10 10 10 14 13 16 14 18 17 15 13 12 15 13 9 9 12 15 9 9 9 13 11 9 9 10 8 10 8 9 12 19 19 19 17 17 17 15 16 10 10 9 11 9 9 8 8 7 8 10 11 12 18 15 15 14 15 14 15 16 14 9 9 9 12 13 33 36 37 28 28 20 19 13 12 12 19 17 18 13 11 11 11 12 12 14 14 15 15 20 28 21 15 12 12 15 15 11 21 12 12 11 11 23 20 12 11 11 16 16 15 8 8 8 10 10 14 15 18 14 13 12 12 10 10 16 13 13 15 11 11 11 21 19 23 24 19 17 18 17 17 15 23 16 10 9 9 9 9 9 11 12 12 12 12 12 12 12 10 10 13 10 9 9 8 8 8 8 8 9 8 10 10 10 8 10 11 13 19 23 22 19 19 16 13 15 16 10 10 10 15 11 18 14 21 18 15 16 10 9 10 9 10 9 10 16 18 20 20 15 15 14 14 15 18 20 28 23 23 18 18 12 11 11 12 12 11 8 8 8 8 8 9 11 9 10 10 10 10 8 11 11 12 11 8 8 10 8 8 10 11 11 9 11 11 11 11 11 11 12 12 15 14 8 8 8 12 12 10 10 8 9 9 9 9 9 11 11 12 21 22 24 15 15 15 16 16 11 11 10 11 10 15 14 11 9 9 10 9 9 9 11 16 12 16 13 10 10 10 10 11 12 11 12 12 18 19 15 14 9 8 8 6 6 8 8 8 8 8 6 6 8 8 15 10 11 11 13 10 8 8 8 8 8 8 10 10 11 8 8 7 6 8 8 8 8 8 7 6 8 8 8 8 8 13 12 10 10 10 11 11 10 8 8 8 8 8 8 8 8 8 8 8 10 7 6 8 8 8 7 6 8 8 8 9 10 10 10 10 11 11 12 10 8 6 6 6 6 8 6 6 8 8 9 9 9 9 11 9 9 10 10 12 10 10 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 8 10 8 8 8 10 10 11 12 8 8 8 8 8 11 11 11 11 11 11 11 11 10 10 10 8 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 6 6 8 8 11 12 12 15 11 11 11 10 10 10 11 9 8 8 8 8 8 9 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 10 12 11 12 12 12 15 12 11 8 8 8 8 8 9 12 9 8 8 10 10 10 8 8 8 8 8 8 8 9 13 8 8 6 6 8 8 10 10 8 9 9 9 8 8 8 8 8 8 18 11 11 10 10 10 10 10 12 11 10 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 9 10 10 10 10 10 10 8 8 8 8 8 8 10 10 9 9 9 8 8 8 8 9 9 10 10 10 10 10 10 10 9 12 9 9 8 8 8 8 8 8 10 7 7 10 8 8 8 8 8 8 6 8 6 6 8 6 8 8 8 8 8 8 7 7 10 8 8 8 8 10 11 11 8 8 8 10 12 8 10 10 10 10 10 8 8 7 7 7 9 8 8 6 6 8 8 9 9 10 8 8 8 8 8 8 11 11 13 10 10 7 7 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 12 8 6 8 10 8 8 8 8 8 8 6 6 8 8 8 8 6 6 8 10 10 9 9 11 12 9 9 9 8 8 10 10 9 8 8 8 8 8 8 10 11 11 8 8 8 8 8 8 8 13 12 8 8 6 6 8 8 8 6 6 8 8 9 10 8 8 8 8 6 6 8 6 6 6 6 8 8 8 8 8 8 10 8 9 10 8 8 8 8 10 10 15 12 3 0	Open. Hide. 10 10 10 14 13 16 24 11 7 6 6 6 9 10 9 10 10 9 10 13 21 29 30 34 32 33 36 40 39 44 33 33 33 28 33 37 40 41 37 22 21 10 6 6 6 7 7 6 6 7 8 14 9 10 12 12 15 26 27 37 41 41 47 53 53 59 59 59 34 25 20 10 8 8 8 10 10 9 10 10 14 14 21 21 24 27 23 28 37 41 59 48 48 48 57 57 48 46 43 46 46 42 48 48 50 48 57 54 54 54 57 54 54 54 54 54 59 57 48 48 41 41 41 41 41 43 57 57 57 57 44 39 37 37 37 42 42 47 47 47 47 57 57 54 54 57 59 59 57 68 57 57 47 43 43 43 57 57 42 42 41 42 42 46 57 57 57 57 68 57 57 57 57 54 54 57 57 57 57 57 50 50 50 47 47 52 59 59 59 59 59 59 57 57 57 52 52 52 52 52 52 52 52 52 52 52 43 43 35 35 35 47 43 52 52 57 59 57 43 43 33 33 31 44 44 44 43 45 45 44 44 57 35 35 39 43 59 59 59 52 52 57 59 57 52 43 44 39 35 35 34 38 43 20 20 43 43 43 52 57 57 43 39 35 35 42 59 57 57 57 52 52 52 57 44 44 35 39 39 43 43 57 57 52 52 52 57 57 57 52 52 57 57 57 57 52 52 52 57 57 52 52 52 57 57 52 52 38 36 20 20 21 27 33 35 38 32 15 15 13 13 13 24 24 29 29 43 38 43 24 18 15 11 11 11 11 11 11 16 18 18 27 24 19 12 12 25 32 59 44 44 36 29 19 19 18 18 18 27 14 16 14 24 24 24 15 21 11 12 12 24 26 37 30 30 13 13 12 24 24 28 22 28 28 29 25 15 14 14 14 19 28 32 40 21 19 12 12 11 11 12 25 30 34 28 20 20 28 28 25 24 14 10 10 10 10 21 18 23 19 19 15 10 10 10 11 12 12 12 15 10 10 10 13 23 25 31 25 21 21 15 15 18 26 25 25 25 28 36 39 30 30 18 12 12 12 10 10 15 15 14 18 23 37 37 35 32 24 19 12 10 10 10 10 8 8 8 8 13 15 25 28 17 15 15 26 19 31 23 30 24 14 14 14 18 13 13 10 15 10 10 8 8 10 10 9 9 8 8 10 10 10 10 10 10 10 10 12 17 12 11 11 11 11 10 10 10 10 10 10 8 8 8 6 6 11 8 10 10 10 10 18 22 15 19 13 15 15 13 8 8 6 6 8 6 8 8 8 10 22 12 15 7 9 10 10 12 18 26 15 15 12 9 9 8 8 8 8 8 8 8 8 9 9 10 9 13 8 8 8 6 8 8 8 10 10 10 10 10 12 12 12 14 14 10 10 10 10 9 10 10 19 21 15 8 6 6 8 8 8 10 9 6 8 6 6 6 6 8 6 7 10 8 8 8 8 8 8 8 8 10 10 10 15 16 13 14 15 23 21 22 19 9 8 8 8 13 8 8 8 8 8 8 8 8 8 8 11 10 10 10 12 11 14 24 28 37 35 28 25 15 8 8 8 7 7 8 10 10 11 15 14 9 9 9 8 8 8 8 6 8 6 7 10 10 10 10 13 12 13 3 0 3 9 9 9 7 6 6 6 12 10 10 13 8 6 6 6 8 8 8 8 8 8 8 8 8 10 8 7 8 8 8 10 8 8 6 6 8 8 8 6 6 8 8 11 11 12 11 10 10 10 12 12 6 6 6 8 8 8 8 8 8 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no260_i09.g1 MSMg01no260_i09.g1 CHROMAT_FILE:
MSMg01no260_i09.g1 PHD_FILE: MSMg01no260_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:39 2005
         (250 letters)



>mm_chr10_83845663_83846312
          Length = 650

 Score =  472 bits (244), Expect = e-138
 Identities = 247/248 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagcggttgagtgcaatctgagaggggggtgggggatgccttctcggagggtggctgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agagcggttgagtgcaatctgagaggggggtgggggatgccttctcggagggtggctgtg 389

                                                                       
Query: 61  cacagctgccttgaatgacattccattcatccaaggatggctccttttttaaaaacaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cacagctgccttgaatgacattccattcatccaaggatggctccttttttaaaaacaaaa 329

                                                                       
Query: 121 ataggcttattctaggggcttcattcaaaacagcttctgtgggtctcagcacccgaggct 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ataggcctattctaggggcttcattcaaaacagcttctgtgggtctcagcacccgaggct 269

                                                                       
Query: 181 ccccagccctgtggatagccccagctccttgctaatgctcaagtgcaaatcaggctggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccccagccctgtggatagccccagctccttgctaatgctcaagtgcaaatcaggctggag 209

                   
Query: 241 atggtaga 248
           ||||||||
Sbjct: 208 atggtaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space:   154481
Effective search space used:   154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information