Query= MSMg01no261_c15.b1 MSMg01no261_c15.b1 CHROMAT_FILE:
MSMg01no261_c15.b1 PHD_FILE: MSMg01no261_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:29 2005
(643 letters)
>mm_chr10_8980764_8981805
Length = 1042
Score = 1205 bits (623), Expect = 0.0
Identities = 635/639 (99%), Gaps = 1/639 (0%)
Strand = Plus / Plus
Query: 5 gaattctgattgcatgtcaggaaactccaaggaaacacgagtcttgtggcctcaatttct 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgattgcatgtgaggaaactccaaggaaacacgagtcttgtggcctcaatttct 264
Query: 65 tctgaacaaggaatcaattttttcaatatgtttttgtgttcctcccaggtgcagcagaaa 124
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgaacaaggaatcaa-ttttggaatatgtttttgtgttcctcccaggtgcagcagaaa 323
Query: 125 ggtgtgaatttacctctatagaaaaagatgtttttgccatatgtggcttatccacccagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtgtgaatttacctctatagaaaaagatgtttttgccatatgtggcttatccacccagt 383
Query: 185 gtggcttgtctactatatgtgggttgtccacccagtgtggcttgtccactatatgtgggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtggcttgtctactatatgtgggttgtccacccagtgtggcttgtccactatatgtgggt 443
Query: 245 tgttcactatgtgcagcttgcccttttgattggacattttactcatgtgactccttttaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgttcactatgtgcagcttgcccttttgattggacattttactcatgtgactccttttaa 503
Query: 305 ctgcaagattataaaatgtgaggttatctgactaagggtgacgagtgcatgagacttcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgcaagattataaaatgtgaggttatctgactaagggtgacgagtgcatgagacttcag 563
Query: 365 tctgcctcatttaatggctccactctctcatgtcacaccacttctagagcagcgaaccta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctgcctcatttaatggctccactctctcatgtcacaccacttctagagcagcgaaccta 623
Query: 425 caggtagtgaatatacctgttatttcatacctcttagacaggaagccaggaattttgaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caggtagtgaatatacctgttatttcatacctcttagacaggaagccaggaattttgaga 683
Query: 485 aactccaaattgtcaaaaaatgactcatcatatatctttttggcatgtcctttacatagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aactccaaattgtcaaaaaatgactcatcatatatctttttggcatgtcctttacatagt 743
Query: 545 agaatattcttaataagaatattatttgtagacaaattttaggaccaataagttcttcgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaatattcttaataagaatattatttgtagacaaattttaggaccaataagttcttcgt 803
Query: 605 aagaccttaacagctctccctggatcatcattagttaat 643
|||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aagaccttaacagctctccctggatcatcattagttaat 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_c15.g1 MSMg01no261_c15.g1 CHROMAT_FILE:
MSMg01no261_c15.g1 PHD_FILE: MSMg01no261_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:29 2005
(624 letters)
>mm_chr10_9157792_9158815
Length = 1024
Score = 1067 bits (552), Expect = 0.0
Identities = 610/646 (94%), Gaps = 31/646 (4%)
Strand = Plus / Minus
Query: 1 tccaaaggagcctttctggggaaactgaactgactagggttaatgtctagaggtaatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tccaaaggagcctttctggggaaactgaactgactagggttaatgtctagaggtaatggc 584
Query: 61 ctctcccggtgggtcattaattcccaggaattggcctatgcttcaattgctattgcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctctcccggtgggtcattaattcccaggaattggcctatgcttcaattgctattgcttaa 524
Query: 121 gtaaacaataaataacatcacccagatatgtaatgaactataaaacgaccacttctcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtaaacaataaataacatcacccagatatgtaatgaactataaaacgaccacttctcagc 464
Query: 181 ctgcactgttgatccgcccgcagcacatgcaagactaccttctattaatcacccctgcct 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctgcactgttgattcgcccgcagcacatgcaagactaccttctattaatcacccctgcct 404
Query: 241 gattgattagtttcaatcagcaccctgtcccctattttctttcaaaatagattaattcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gattgattagtttcaatcagcaccctgtcccctattttctttcaaaatagattaattcca 344
Query: 301 tacttatgaaggcagggaataaaagcatgaattttaggcccaggggaaaaagacaaaagg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tacttatgagggcagggaataaaagcatgaattttaggcccaggggaaaaagacaaaagg 284
Query: 361 tgtctgctataggatttctgtccccctgcctctggttttcttatgctctcgtttctttta 420
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 283 tgtctgctataggatttctgtccccctgcctctggttttcttatgctcttatttctttta 224
Query: 421 atacaacctgatttcctaatgca-agtat-tcga-a------------------------ 453
||||||||||||||||||||||| | ||| | | |
Sbjct: 223 atacaacctgatttcctaatgcata-tatat--atatatatatatatatatatatatata 167
Query: 454 -atatatatgctttctcaataatgctaatatttgtgctggtaacattagagggagctgaa 512
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tatatatatgctttctcaataatgctaatatttgtgctggtaacattagagggagctgaa 107
Query: 513 tggatctctcaacagagagaggactgttgcaattacgttaattaggtaagctctcatgac 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tggatctctcaacagagagaggactgttgcaattacgttaattaggtaagctctcatgac 47
Query: 573 tggttcagctctagcggccatcatttcttcaacctctccatgatct 618
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 46 tggttcagctctagctgccatcatttcttcaacctctccatgatct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
