Query= MSMg01no263_b04.b1 MSMg01no263_b04.b1 CHROMAT_FILE:
MSMg01no263_b04.b1 PHD_FILE: MSMg01no263_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:53 2005
(319 letters)
>mm_chr10_60018705_60019423
Length = 719
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%)
Strand = Plus / Plus
Query: 5 gaattctgggtgacttagcgttaaaatataaaccctctttggcactccgtgtgcttctcc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgggtgacttagtgttaaaatataaaccctctttggcactccgtgtgcttctcc 264
Query: 65 atacccattggaaaagagaagaatgcaggggcactaaggggctgatgcccctctctgcag 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacccattggaaaagagaagcatgcaggggcactaaggggctgatgcccctctctgcag 324
Query: 125 agttgaatccatgcttgggatgcagtgctgccttagcacatggtttccaaggctctaggt 184
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 ggttgaatccatgcttgggatgcagtgctgccttagcacatggcttccaaggctctaggt 384
Query: 185 ctttgttagagaagtttcttactccccaggaaggactagtaccctgggcacagcaaggga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttgttagagaagtttcttactccccaggaaggactagtaccctgggcacagcaaggga 444
Query: 245 tagctgggtacacctggcagtcccatccacgcccttgcttgttgcttcattagggacctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagctgggtacacctggcagtcccatccacgcccttgcttgttgcttcattagggacctc 504
Query: 305 agaagctgagactaa 319
|||||||||||||||
Sbjct: 505 agaagctgagactaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_b04.g1 MSMg01no263_b04.g1 CHROMAT_FILE:
MSMg01no263_b04.g1 PHD_FILE: MSMg01no263_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:53 2005
(293 letters)
>mm_chr11_99313806_99314498
Length = 693
Score = 503 bits (260), Expect = e-147
Identities = 284/292 (97%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 caggacagccagagctatatggtgacgtcatgtctcaaaaaaaagtattgtcactgggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacagccagagctatatggtgacgtcatgtctcaaaaaaaagtattgtcactgggct 260
Query: 61 catataggtaatattaggtaagttggaaacatatttctgaaggagactgtgactgaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catataggtaatattaggtaagttggaaacatatttctgaaggagactgtgactgaggac 320
Query: 121 atatatgatcactttgatactcatatgcatagtgcccaggaagtattgcaagtgggaggg 180
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 atatatgatcactttgatattcatatgcatagtgaccaggaagtattgcaagtgggaggg 380
Query: 181 tctaagaaaggcttacacaaaacatcaacttttcagatattcatggactagttaggatag 240
|||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaagaaagacttacagagaacatcaacttttcagatattcatggactagttaggatag 440
Query: 241 agttct-atgtgataaggtcttgtcctaaagtctactcactccagaggggtg 291
|||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 agtt-tcatgtgataaggtcttgtcctaaagtctacttactccagaggggtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
