Query= MSMg01no263_n02.b1 MSMg01no263_n02.b1 CHROMAT_FILE:
MSMg01no263_n02.b1 PHD_FILE: MSMg01no263_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:50 2005
(691 letters)
>mm_chr12_61925730_61926820
Length = 1091
Score = 1236 bits (639), Expect = 0.0
Identities = 661/669 (98%), Gaps = 2/669 (0%)
Strand = Plus / Minus
Query: 23 ggaaatgggcattgtcttctgggtctgagttacctcattccttcaccaaatcaacagtta 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 ggaaatgggcattgtcttctgggtctgagttacctcattccttcaccaaatcaacagtta 1030
Query: 83 atgaaaatgtgctacctatacacaatgtaattcaattttgctgtaaacaaaactaaaacc 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1029 atgaaaatgtgctacctatacacaatgtaattcaattttgctgtaaacaaaactgaaacc 970
Query: 143 atgagatttgtaggtaaagggacagaaaatactacactgagtggagtaacacagtcacag 202
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 969 atgagatttgtaggtaaagggacagaaaatactacactgagtagagta--acagtcacag 912
Query: 203 agagacaaatgccaaatgctctttcttatttgtggacttacagattattttatttagcca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 agagacaaatgccaaatgctctttcttatttgtggacttacagattattttatttagcca 852
Query: 263 ttaaattataatttccagcatctaaaattaccagcatatgaattattaacagataattta 322
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 851 ttaaattataatttccagcatctaaaattaccagtatatgaattattaacagataattta 792
Query: 323 aaagtttaccgaatcatgagagaaccatgaagtggttagtcatacagttaacaagatggt 382
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 791 aaagtttaccgaatcatgagagaaccatgaagtggttagtcatacagttaagaagatggt 732
Query: 383 tgtaagttgtaatagtagttcaaaatcaaaagtatgagacagaagccccgggtgtggaag 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgtaagttgtaatagtagttcaaaatcaaaagtatgagacagaagccccgggtgtggaag 672
Query: 443 aaaggtgaaggaatcaggagtagtatatataagggaagttgatgacctgtatgcatagtc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaaggtgaaggaatcaggagtagtatatataagggaagttgatgacctgtatgcatagtc 612
Query: 503 tgtctcagagccattcattttatctgcactaatagctacaaaattatatccttatatact 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtctcagagccattcattttatctgcactaatagctacaaaattatatccttatatact 552
Query: 563 cataaaatacatttaagaatttgtataaattctcttttgaaaacaatgtaaaaaattaac 622
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 551 cataaaatacatttaagaatttgtataaattctcttttgaaaacaatgtagaaaattagc 492
Query: 623 gattttgaattaagcatggtttctgtgcataagtagaaatatacttttcctcagtacaac 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gattttgaattaagcatggtttctgtgcataagtagaaatatacttttcctcagtacaac 432
Query: 683 aaattagaa 691
|||||||||
Sbjct: 431 aaattagaa 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_n02.g1 MSMg01no263_n02.g1 CHROMAT_FILE:
MSMg01no263_n02.g1 PHD_FILE: MSMg01no263_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:50 2005
(295 letters)
>mm_chr10_60191324_60192018
Length = 695
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Minus
Query: 1 cacagagggtggaatttagaaaggaagtttcagataagtagacaggagctttggggaggg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 493 cacagagggtggaatttagaaaggaagttacagataagtagacaggagctttggggaggg 434
Query: 61 gttggagctcctgtacagcagaaggggtcctaggaaatggggtaccatggagctgctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gttggagctcctgtacagcagaaggggtcctaggaaatggggtaccatggagctgctctt 374
Query: 121 gtggggcccaatgaaggacttacgacgtccttcatagaaatgactaatgtcacccatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtggggcccaatgaaggacttacgacgtccttcatagaaatgactaatgtcacccatcat 314
Query: 181 ctcttatgacgatgagcatgtggagtggaatgaagtgtcagtgcgattggctcaccgatg 240
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctcttatgacgatgagcgtgtagagtggaatgaagtgtcagtgcgattggctcaccgatg 254
Query: 241 acgtgttcagatagttcttctttttatcagtcaaatcttccagtatagtttcc 293
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acgtgttcagatagctcttctttttatcagtcaaatcttccagtatagtttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
