Query= MSMg01no267_l15.b1 MSMg01no267_l15.b1 CHROMAT_FILE:
MSMg01no267_l15.b1 PHD_FILE: MSMg01no267_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:51 2005
(316 letters)
>mm_chr10_41692381_41693095
Length = 715
Score = 516 bits (267), Expect = e-151
Identities = 304/319 (95%), Gaps = 8/319 (2%)
Strand = Plus / Plus
Query: 4 ggaattcaaggtatagcgtgttctctttggaagggttacctctgacggacctcatcacaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaggtatagcgtgttctctttggaagggttacctctgacggacctcatcacaa 263
Query: 64 aatgtagacgttggaggccaatctgtaaataccataatgggagcttagctgcggacatgc 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatgtagacgttgtaggccaatctgtaaataccataatgggagcttagctgcggacatgc 323
Query: 124 aggaagtgtgcgccagcaaaaaggaagtgactcgggccatttttagctcttttcaacaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggaagtgtgcgccagcaaaaaggaagtgactcgggccatttttagctcttttcaacaat 383
Query: 184 aacatctaagaaaaaaaaaagttgaaacctcaacaactaaatacacgccaaagcctctcg 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacatctaagaaaaaaaaa-gttgaaacctcaacaactaaatacacgccaaagcctctcg 442
Query: 244 gttatgcacttaagtaa--g----gttggggaagtgaccgatatcccaacccgaggggag 297
||||||||||||||||| | |||||| |||||| || | |||||||||||| |||
Sbjct: 443 gttatgcacttaagtaaatgaacagttggg-aagtgatggagaccccaacccgaggagag 501
Query: 298 ctggagctctacggggtgc 316
| |||||||||||||||||
Sbjct: 502 ccggagctctacggggtgc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_l15.g1 MSMg01no267_l15.g1 CHROMAT_FILE:
MSMg01no267_l15.g1 PHD_FILE: MSMg01no267_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:51 2005
(285 letters)
>mm_chr10_41846313_41846996
Length = 684
Score = 487 bits (252), Expect = e-142
Identities = 276/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 1 tgagaccaactcctccactgcagaccaaataaaatgtacagtcaccaacgggtgtcccac 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 482 tgagaccaactcctccactgcagaccaaataaaatgtacagtcaccaaagggtgtcccat 423
Query: 61 atccagtgcttgctgaaaggagccacttgcggtcatagaaggaggaagaagccagactct 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 atccagtgcttgctgaaaggagccacttgaggtcatagaaggaggaagaagccagactct 363
Query: 121 gagcaggtgcatgcctggggacctggggggggggtgttgtccaagagcatttataccttc 180
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 362 gagcaggtgcatgcctggggatctgggggggggg-gttgtccaagagcatttataccttc 304
Query: 181 cttgttcttgtgcctttggtcaaccaccatcagttctcccagagggactggcaggaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cttgttcttgtgcctttggtcaaccaccatcagttctcccagagggactggcaggaagtc 244
Query: 241 ttttatattaaaagggaacaggttgct-tctctgtatgttgtga 283
||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct: 243 ttttaaattaaaagggaacaggttg-tgtctctgtatgttgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
