Query= MSMg01no269_p14.b1 MSMg01no269_p14.b1 CHROMAT_FILE:
MSMg01no269_p14.b1 PHD_FILE: MSMg01no269_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:32 2005
(229 letters)
>mm_chr10_97849373_97850001
Length = 629
Score = 422 bits (218), Expect = e-122
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 1 aaaagaaaacaaaagaaagaantataatgttaacattaagaagatctttctcctggtgtc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaaagaaaacaaaagaaagaaatataatgttaacattaagaagatctttctcctggtgtc 370
Query: 61 ataaatcaactcttctctgtgcatcctaagacttatccctttgttcttcacagggctatc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 369 ataaatcaactcttctctgtgcgtcctaagacttatccctttgttcttcacagggctatc 310
Query: 121 tttatttactagttgagtttcgaggatggtgtgacatggtagtaactcttcctgtggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tttatttactagttgagtttcgaggatggtgtgacatggtagtaactcttcctgtggtat 250
Query: 181 attatttaaacttcttaatgatcttcaggtcacattgagtcttgcagac 229
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 249 attatttaaacttcttaacgatcttcaggtcacattgagtcttgcagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no269_p14.g1 MSMg01no269_p14.g1 CHROMAT_FILE:
MSMg01no269_p14.g1 PHD_FILE: MSMg01no269_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:32 2005
(643 letters)
>mm_chr10_97827078_97828120
Length = 1043
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Plus
Query: 1 aggggagggtcctattggtgcaatcttggtgcttaaaagcttactatctgtagttctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggggagggtcctattggtgcaatcttggtgcttaaaagcttactatctgtagttctccc 260
Query: 61 gtttgagggcaagagaagagaacttcatactctagagctagggaagaaatggctttttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgagggcaagagaagagaacttcatactctagagctagggaagaaatggctttttct 320
Query: 121 ctgcctttgaaaacaacttcagagagaagcaagttgtataatgccacccacattggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcctttgaaaacaacttcagagagaagcaagttgtataatgccacccacattggcaag 380
Query: 181 tacagatgttcttgctctgccaatttaaacactaacctcttctggaaatgtcctcataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacagatgttcttgctctgccaatttaaacactaacctcttctggaaatgtcctcataga 440
Query: 241 aacacccagaagtaatgttcagcatttctcccttaaactcagtcaaatgaaacctgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacccagaagtaatgttcagcatttctcccttaaactcagtcaaatgaaacctgaaat 500
Query: 301 taactattaatgtcttggttaatggctgcatggtcctgggaaattaaagaggttgatttg 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taactattaatggcttggttaatggctgcatggtcctgggaaattaaagaggttgatttg 560
Query: 361 aagatttttaataagagggaaggtttacagcatagtctagattagctgttcccaataaaa 420
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 561 aagatttttaataagagggaaggtttacagcatagtctagactagctattcccaataaaa 620
Query: 421 gaattgactgtcttctacacaaagcctcaaaatgggtcaagacaacatttttaaaaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattgactgtcttctacacaaagcctcaaaatgggtcaagacaacatttttaaaaatat 680
Query: 481 agctttgttgagtggtaggaaatcctataagggaccatgattcaggaagtaccattgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctttgttgagtggtaggaaatcctataagggaccatgattcaggaagtaccattgagc 740
Query: 541 tgtggaggaatggctgtgtgcattgcctactatgtgaaacaaacttataatacttgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtggaggaatggctgtgtgcattgcctactatgtgaaacaaacttataatacttgtgat 800
Query: 601 ctaacaagaaataaa-tggatcatggaagttgaaattaatattc 643
||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 801 ctaacaagaaataaaatg-atcatggaagttgaaattaatattc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
