Query= MSMg01no274_j22.b1 MSMg01no274_j22.b1 CHROMAT_FILE:
MSMg01no274_j22.b1 PHD_FILE: MSMg01no274_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:11 2005
(323 letters)
>mm_chr10_21188838_21189560
Length = 723
Score = 542 bits (280), Expect = e-158
Identities = 310/322 (96%), Gaps = 6/322 (1%)
Strand = Plus / Minus
Query: 4 ggaattccactggag-atacctgaggtttttttttccctttgccagtgggtatcagctgc 62
||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 404 ggaattccactggagaaaaactgagggttttttttccctttgccagtgggtatcagctgc 345
Query: 63 aaagaggttcttggcta--cccggtgggaccctagatcttctttcctgtctcatgctgtg 120
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 344 aaagaggttcttggctagg---ggtgggaccctagatctcctttcctgtctcatgctgtg 288
Query: 121 attccattagctatctctcttatatagtccagaactgcctgtctgtggaatggtgttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 attccattagctatctctcttatatagtccagaactgcctgtctgtggaatggtgttacc 228
Query: 181 cacagcggcctgggtcatcctgttagacatgcccaaagaccaacatgataaagacaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cacagcggcctgggtcatcctgttagacatgcccaaagaccaacatgataaagacaatta 168
Query: 241 ctcaattgagattttttttttcaggtaattgtaggctgccaatttgacgattaattctaa 300
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 167 ctcaattgagatttttttttccaggtaattgtaggctgccaagttgacgattaattctaa 108
Query: 301 ctaggacactaaccgttgtgtg 322
||||||||||||||||||||||
Sbjct: 107 ctaggacactaaccgttgtgtg 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_j22.g1 MSMg01no274_j22.g1 CHROMAT_FILE:
MSMg01no274_j22.g1 PHD_FILE: MSMg01no274_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:12 2005
(290 letters)
>mm_chr10_21019497_21020186
Length = 690
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Plus
Query: 1 aggccctcatgcttgtgcagtaagagctgagacgtttcaaggaaacattcagcagcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggccctcatgcttgtgcagtaagagctgagacgtttcaaggaaacattcagcagcttaa 260
Query: 61 gaaaagctttggtgccttttttttcctaatattctctgtaacgtgtagttaatataaatt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaagctttggtgcctttttttttctaatattctctgtaacgtgtagttaatataaatt 320
Query: 121 cactaaaatacttgatcattggtgaagttcttaaagctctgaaggtaggtagtaataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactaaaatacttgatcattggtgaagttcttaaagctctgaaggtaggtagtaataaat 380
Query: 181 tttatatcaggaatattttgaatattagactggaatttgggaaccatttaattaggaaaa 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tttatatcaggaatattttgaatattagactggcatttgggaaccatttaattaggaaaa 440
Query: 241 gaatagtagtatttatacagattaaggaggcttacaagggttggtcttct 290
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatagtagtatttagacagattaaggaggcttacaagggttggtcttct 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
