Query= MSMg01no274_k03.b1 MSMg01no274_k03.b1 CHROMAT_FILE:
MSMg01no274_k03.b1 PHD_FILE: MSMg01no274_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:12 2005
(698 letters)
>mm_chr10_26395034_26396129
Length = 1096
Score = 1270 bits (657), Expect = 0.0
Identities = 685/695 (98%), Gaps = 4/695 (0%)
Strand = Plus / Plus
Query: 5 gaattccacaattctac-gcatcaatatacttacactccttcccttctacagaatattta 63
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaat-caaaagcatcaatatacttacactccttcccttctacagaatattta 263
Query: 64 cttcatggtttaatcaaattttaatacttattaaaactgaactcaaacataactaccgtg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 cttcatggtttaatcaaattttaatacttattaaaactgaactcaaacataactgccgtg 323
Query: 124 aaatctttacaagtgtctatttcattttcagctgaggtagctttaattgccctactgtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatctttacaagtgtctatttcattttcagctgaggtagctttaattgccctactgtgt 383
Query: 184 agctcactttgctcttagctgccgtaataattaacatatgcctcctatcctctctctgta 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 384 agctcactttgctcttagctgcggtaataattaacatatgcctcctatcctctctctgta 443
Query: 244 aagcacttccaagtccaccggcccatttgacctgacaactctgctgctgggagaataata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagcacttccaagtccaccggcccatttgacctgacaactctgctgctgggagaataata 503
Query: 304 actgctctcaggagaaactgaaaaccactatcaaaattttagatatcagaagtcagatga 363
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actgctcccaggagaaactgaaaaccactatcaaaattttagatatcagaagtcagatga 563
Query: 364 tcctaatgctaaaaggaaaaaataaacctaaacagatatcttacagatactgataaaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcctaatgctaaaaggaaaaaataaacctaaacagatatcttacagatactgataaaaat 623
Query: 424 ttcaaaattagcagaagaaattcaattccatatttaaaaaaaaatcagtataaccaaaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcaaaattagcagaagaaattcaattccatatttaaaaaaaaatcagtataaccaaaga 683
Query: 484 ggacttatcacagaagggcaagtttatttcagaaatgagaaagtcattaaagattccatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggacttatcacagaagggcaagtttatttcagaaatgagaaagtcattaaagattccatg 743
Query: 544 taaaactttttaatgaaaaaaaaaatctatatggtaatctctgtattttctatggaggag 603
||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 744 taaaactttttaatgaaaaaaaa--tctatatggtaatctctgtattttctatgggggag 801
Query: 604 aaaaaataatacccttttgtgatcaaagcactgaaaaaaccctgaattgataaagacttt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aaaaaataatacccttttgtgatcaaagcactgaaaaaaccctgaattgataaagacttt 861
Query: 664 tgcaacttggtaaggtatgtatttcttagttttga 698
|||||||||||||||||||||||||||||||||||
Sbjct: 862 tgcaacttggtaaggtatgtatttcttagttttga 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1096
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1086
Effective search space: 747168
Effective search space used: 747168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_k03.g1 MSMg01no274_k03.g1 CHROMAT_FILE:
MSMg01no274_k03.g1 PHD_FILE: MSMg01no274_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:12 2005
(665 letters)
>mm_chr10_26536431_26537495
Length = 1065
Score = 847 bits (438), Expect = 0.0
Identities = 473/486 (97%), Gaps = 4/486 (0%)
Strand = Plus / Minus
Query: 1 agttctaagtaacaccggcgtgctcactaattccacatgtgttgacctcatcctccaaat 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agttctaagtaacaccggtgtgctcactaattccacatgtgttgacctcatcctccaaat 425
Query: 61 gaggtcataagtcgtgctgacaggggacgcaattctttggccctgtactactcaacaacc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 424 gaggtcataagtcgtgctgacaggggacgcaattctttgcccctgtactactcaacaacc 365
Query: 121 tatttcctgctctctgccagtgtttaactctcctccttttaactccagaatgaaggtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tatttcctgctctctgccagtgtttaactctcctccttttaactccagaatgaaggtata 305
Query: 181 ttggacaaagtcgtgcaacaaaactcctttattaaaaacttcaaactttttgtatagaat 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttggacaaagtcatgcaacaaaactcctttattaaaaacttcaaactttttgtatagaat 245
Query: 241 agagaaaccagtcagcatataaatttcccaatatgaagatatacaaattattt--aaaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 244 agagaaaccagtcagcatataaatttcccaatatgaagatatacaaattatttttaaaat 185
Query: 299 ttttaaaatttatttttgtgggagaggatgcaaatgacatgcccacatatgggagtcaga 358
|||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 ttttaa--tttatttctgtgggagaggatgcaaatgacatgcccacatttgggagtcaga 127
Query: 359 ggacaattcattaggttgtcagacttggcaccgagcacctacctactgagccaactcaca 418
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggacacttcatcaggttgtcagacttggcaccgagcacctacctactgagccaactcaca 67
Query: 419 atccatccatctatttgtttttccctccttattttctaaaaaagaaaaaaaagaaaaaga 478
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 acccatccatctatttgtttttccctccttattttctaaaaaagaaaaaaaagaaaaaga 7
Query: 479 aaagaa 484
||||||
Sbjct: 6 aaagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
