Query= MSMg01no278_j11.b1 MSMg01no278_j11.b1 CHROMAT_FILE:
MSMg01no278_j11.b1 PHD_FILE: MSMg01no278_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:58 2005
(597 letters)
>mm_chr10_62301265_62302261
Length = 997
Score = 1108 bits (573), Expect = 0.0
Identities = 591/597 (98%)
Strand = Plus / Minus
Query: 1 atagaaagtcacaatcttgaaaactgcagtcaggtactaagctgcgatcagaatttgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atagaaagtcacaatcttgaaaactgcagtcaggtactaagctgcgatcagaatttgagt 738
Query: 61 tcccatgacccatcatgccaggatgcaccctacagtcaaattgaagaagatgtcgcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcccatgacccatcatgccaggatgcaccctacagtcaaattgaagaagatgtcgcagca 678
Query: 121 caattgacccaacttgcatccacgattaatcacatcaacgccgaggtcaggaatgctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caattgacccaacttgcatccacgattaatcacatcaacgccgaggtcaggaatgctgaa 618
Query: 181 agtacaccaggaagccttgtcgcaaagaacacaaagcaaaaacacagtcaggagaaacgc 240
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agtacaccagaaagccttgttgcaaagaacacaaagcaaaaacacagtcaggagaaacgc 558
Query: 241 atggtacaacagaagccaccttctagtacacaaactaaacccagtgtaccatcagcaaag 300
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atggtacatcagaagccaccctctagtacacaaactaaacccagtgtaccatcagcaaag 498
Query: 301 ccaaagaaggcccagaaaaaggcaagaccgaccccacacgcaaacaagcggaaaaagaaa 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 497 ccaaagaaggcccagaaaaaggcaagagcgaccccacacgcaaacaagcggaaaaagaaa 438
Query: 361 cccccagcccgaagctctcaagaaaatgatcagaagaagcaagagcagctagctatagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cccccagcccgaagctctcaagaaaatgatcagaagaagcaagagcagctagctatagag 378
Query: 421 tatagtaaaatgcatgacatttggatgtcatctaagtttcaaagatttggccagtctagt 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 377 tatagtaaaatgcatgacatttggatgtcatctaagtttcaaaggtttggccagtctagt 318
Query: 481 ccacgtagttttcctgttctgttgagaaatattcctgtctttaaccaaatattaaagccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccacgtagttttcctgttctgttgagaaatattcctgtctttaaccaaatattaaagccc 258
Query: 541 gtgactcagagtaaaacaccctcacaacataatgagttatttcctcctatcaatcag 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgactcagagtaaaacaccctcacaacataatgagttatttcctcctatcaatcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_j11.g1 MSMg01no278_j11.g1 CHROMAT_FILE:
MSMg01no278_j11.g1 PHD_FILE: MSMg01no278_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:58 2005
(194 letters)
>mm_chr10_62217325_62217920
Length = 596
Score = 368 bits (190), Expect = e-106
Identities = 194/196 (98%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 1 gacactacctcacaaaaaccagaaccatat--agagaataaacataaaaagcagaatata 58
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gacactacctcacaaaaaccagaaccatataaagagaataaacataaaaagcagaatata 260
Query: 59 aatagtaatgcttagtgatgcagttatgtaattgcagcccgtaaggatactgaaacagaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatagtaatgcttagtgatgcagttatgtaattgcagcccgtaaggatactgaaacagaa 320
Query: 119 taatgtgagttgcaggcttaacttgagtttaaggccagcctagaaactccgtaagattat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatgtgagttgcaggcttaacttgagtttaaggccagcctagaaactccgtaagattat 380
Query: 179 tcagaagtaaaaagaa 194
||||||||||||||||
Sbjct: 381 tcagaagtaaaaagaa 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 596
Length adjustment: 8
Effective length of query: 186
Effective length of database: 588
Effective search space: 109368
Effective search space used: 109368
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
