Query= MSMg01no288_a11.b1 MSMg01no288_a11.b1 CHROMAT_FILE:
MSMg01no288_a11.b1 PHD_FILE: MSMg01no288_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:01 2005
(649 letters)
>mm_chr10_22103862_22104909
Length = 1048
Score = 795 bits (411), Expect = 0.0
Identities = 564/625 (90%), Gaps = 24/625 (3%)
Strand = Plus / Plus
Query: 5 gaattccatcccaatgcagaagaaaatgaa----------gatagaaactgggaggcaga 54
|||||||||||||| | ||||||||||||| |||||||||||||||||||
Sbjct: 196 gaattccatcccaaagaagaagaaaatgaagatagaaactgatagaaactgggaggcagc 255
Query: 55 ccagtggcaagaccacttgctgacccatattttattccaaacacacaaattggcagctca 114
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 256 ccagtggcaagaccacttgctgacccatattttattccaaacacccaaa-tggcagctca 314
Query: 115 caagctctccaggtccaggaggtccagccccttcttctccagagacagaggcattcacac 174
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caagcactccaggtccaggaggtccagccccttcttctccagagacagaggcattcacac 374
Query: 175 aaccaccttgcagacatgcagctgacactcatgaacataacacagaaagaaacaatgcag 234
| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 375 agccaccttgcagacacgcagctgacacacatgaacataacacagaaagaaacaatgcag 434
Query: 235 cagcagctggagcagtgttcccactgtagacaggtggactgagctgctgctggagtccat 294
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 435 cagcagctggagcagtgttcccactggaggcaggtggactgagctgctgctggagtccat 494
Query: 295 tgttcccacctggactgtcctgatggatgggggggggcagagacagtcacacccacagct 354
|| ||||| |||||||| |||||||| | || ||||||| |||||||||||||||||||
Sbjct: 495 tgctcccatctggactgccctgatggctaaggcggggcagggacagtcacacccacagct 554
Query: 355 gagtgaa--actcttggatcccgacagttttaaaatgaagcgggcaagatgtctggaacc 412
| | || ||||| ||| || ||||||| ||||||| ||| ||||||||| || |
Sbjct: 555 g-g-gagccactctcagatgttgagagttttagaatgaaggggg-aagatgtctagattc 611
Query: 413 ccactaaaggcctggacagccaggccccaggccccactctgaatggagatcctccaaact 472
||||| |||||||||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 612 ccactcaaggcctggaca---a----ccaggccccactctgaatggggatcctccaaact 664
Query: 473 cctccaacccctcgcttaatccccgagtcagggagcagagctggttatgagtccattaac 532
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 665 cctccaacccctcgcttaatccccgagtcagggagcagagctggtcatcagtccattaac 724
Query: 533 ctgaacctccatgctctgcagcagggcctggggctcactctggaatgtggggaaggaagg 592
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 725 ctgaacctccatgctctgcagcagggcctggggctgactctggaatgtggggaaggaggg 784
Query: 593 aagaagaaa-tacaggctccaggga 616
||||||| | |||||||||||||||
Sbjct: 785 aagaagacagtacaggctccaggga 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space: 663282
Effective search space used: 663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_a11.g1 MSMg01no288_a11.g1 CHROMAT_FILE:
MSMg01no288_a11.g1 PHD_FILE: MSMg01no288_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:01 2005
(216 letters)
>mm_chr10_7217154_7217769
Length = 616
Score = 387 bits (200), Expect = e-112
Identities = 212/216 (98%)
Strand = Plus / Plus
Query: 1 agcagagaagactgctcagactattttttagattaattactttactttatgtcctgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagagaagactgctcagactattttttagattaattactttactttatgtcctgactg 260
Query: 61 cagtttcttctctgtgcttgctccactacttaactccccaccaaaggtgtttaagccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttcttctctgtgcttgctccactacttaactccccaccaaaggtgtttaagccaat 320
Query: 121 aaaaactcttcattaactggccctgattattctaaatgtttggaatcccaatgtaaaatg 180
| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 321 agaaactcttcattagctggccctgattattctaaatgtttggaattccaatgtagaatg 380
Query: 181 agccatccccagggtgagcttttaaacacaaaacca 216
||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccatccccagggtgagcttttaaacacaaaacca 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
