Query= MSMg01no288_b08.b1 MSMg01no288_b08.b1 CHROMAT_FILE:
MSMg01no288_b08.b1 PHD_FILE: MSMg01no288_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:05 2005
(714 letters)
>mm_chr10_109702066_109703179
Length = 1114
Score = 1299 bits (672), Expect = 0.0
Identities = 700/710 (98%), Gaps = 2/710 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttagaacctatcgtgtcaaacactgggccacacatacatggtcatatgagct 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttagaacctattgtgtcaaacactgggccacacatacatggtcatatgagct 264
Query: 65 aaatacatatgctgagattcaaaatattgtcaaaaataatctggcccttatcccatcaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatacatatgctgagattcaaaatattgtcaaaaataatctggcccttatcccatcaag 324
Query: 125 aactagaacaagtgtccctttgacatgcccagtgtggttgagcactccttctgtggctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aactagaacaagtgtccctttgacatgcccagtgtggttgagcactccttctgtggctct 384
Query: 185 ggattccccgcagggatattttggtctctgtgcaagaaaaacactcagtggctaattcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggattccccgcagggatattttggtctctgtgcaagaaaaacactcagtggctaattcca 444
Query: 245 aatctcagaattcggctgtcaacagttacctcaaattcggatgggttgcctgcaatattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatctcagaattcggctgtcaacagttacctcaaattcggatgggttgcctgcaatattc 504
Query: 305 tccctaaggggtccaagttttaacttttaacacatgtagaaacatatgttccacattgaa 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccctgaggggtccaagttttaacttttaacacatgtagaaacatatgttccacattgaa 564
Query: 365 agacaattaaggttatggttggtcaaggttgctgatcagctatcctcgagatatgtagat 424
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 agacaattaaggttatggttggtcaaggttgttgatcagctatcctcgagatatgtagat 624
Query: 425 tcttagggatcacgtaaatgagctaatataaccagcatggactttatagtatgggtagca 484
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 625 tcttagggatcacgtaaatgagctaatataatcagcatggactttatagtatgggtagca 684
Query: 485 ggagacagtccggacaaagagttgaagctatgctactaggaaaatggaagaagtggccca 544
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 ggagacagtccggacaaagagttgaagctatgctactaggaaaacggaagaagtggccca 744
Query: 545 gggattgcagtttgccgttagaaaaggcaaggagaaggttgtctcttagacacacaagaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gggattgcagtttgccgttagaaaaggcaaggagaaggttgtctcttagacacacaagaa 804
Query: 605 cacaacccagctgacacctttttttttagcttcataagactaacagaatttctgactttt 664
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 805 cacaacccagctgacaccttttgttttagcttcacaagactaacagaatttctgactttt 864
Query: 665 cagaatgatagctttgtgtcattttaagccatcaaatcagtaataatttt 714
|| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 865 caaaatgatagctttgt--cattttaagccatcaaatcagtaataatttt 912
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1114
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1104
Effective search space: 777216
Effective search space used: 777216
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no288_b08.g1 MSMg01no288_b08.g1 CHROMAT_FILE:
MSMg01no288_b08.g1 PHD_FILE: MSMg01no288_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:05 2005
(626 letters)
>mm_chr10_109853629_109854654
Length = 1026
Score = 1143 bits (591), Expect = 0.0
Identities = 618/627 (98%), Gaps = 2/627 (0%)
Strand = Plus / Minus
Query: 1 attgccctgtcttcaatttcagactgcttaaatattcagtaggtagtgtctctggaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 attgccctgtcttcaatttcagactgcttaaatattcagtaggtagtgtctctggaaatg 935
Query: 61 acagtccccaaggagaacaatccctgtgtcagagggcacaggtctcccttcttcatgact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 934 acagtccccaaggagaacaatccctgtgtcagagggcacaggtctcccttcttcgtgact 875
Query: 121 ttgggatcacatttttgttttgttttgttttgttattttttatattgtaagaaggaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 ttgggatcacatttttgttttgttttgttttgttattttttatattgtaagaaggaaggc 815
Query: 181 caagcggtcagtttgcatgtgaagctctcgctttccaaggttacaacttgctgaatatat 240
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 814 caagcggtcaggttgcatgtgaagctcttgctttccaaggttacaacttgctgaatatat 755
Query: 241 ctttgagatagtggacatttatcacagtgtagctctcaaattcgaaatagctgccgaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ctttgagatagtggacatttatcacagtgtagctctcaaattcgaaatagctgccgaagg 695
Query: 301 tatagctggcagaccatcacagtcccggggaacagggtaatcaatcagaagctgccacat 360
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 694 tatagctgggagaccatcacagtcccagggaacagggtaatcaatcagaagctgccacat 635
Query: 361 gatcactatggtaaccatcag-accgccctgtcacactgcaggcattattgaatggtagc 419
||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||
Sbjct: 634 gatcactatggtaaccatcagaacc-ccctgtcacactgcaggcattattgaagggtagc 576
Query: 420 tacaacgttcagctcatcaagtgtgtgtgatcataaacctgttgacactagacatttgat 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 575 tacaacgttcagctcatcaagtgtgtgtgatcataaacctgttgacactagagatttgat 516
Query: 480 acggagttgttattgtctttgtgaattgaaacagactatcatcagacccaagttttgggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acggagttgttattgtctttgtgaattgaaacagactatcatcagacccaagttttgggt 456
Query: 540 ggaaacagtattgcattaaaagaaatattttgtgattgtagacttgagcttgtcattgtc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaaacagtattgcattaaaagaaatattttgtgattgtagacttgagcttgtcattgtc 396
Query: 600 aaccagcacaatacaatagcatgtagc 626
|||||||||||||||||||||||||||
Sbjct: 395 aaccagcacaatacaatagcatgtagc 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
