TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTCAGCTCTTGACATAAATGATGCAATAGATTATTTATGCATGA
GAACCTGGAAGAAAAATATACACAGAGCACTGTAATTGACTCATATTTTA
AACATCTGATTGGTGGTATGCAGTCAACAGTAAACATTTTATTTATTTTA
ATCCCAGGGCTGGAGAGATGGCTCAGCAGATAAGAGCATTTACTAATCTT
GCATAGTTTGGTTTCCAACACCCAGTCTGATGGCTCCAAACCACCTGTAA
CCCTAGCTTCCGGGGTGGGGGTGGGGAGGCACTGACTCTGGTCTCTGTAG
GCACCTGTATTTATACCCACATGTGTGTGCACGCAAACAGCTACCCACTC
CTAAAAATAAGAGTAAATCTTAAAATTTTCTGTCTCTTAAGGTATTAAAT
CACTTAACAAATTAAACCTAAGCTTGAGAAAAGGGGTGGGGCAGGTAACC
CAGTATGAGTAGAGATCCAAGTTTCAAAACCAGATCCCTTAAAGCTTAAT
AGTGTTGTCTATTCATTTCTTCACAGGGAACATGTGAAAGTTATGTAATA
AACGTGTGTTCCAATGACCTGAAAATTGGCTACTAGTTGCCTCCCCTTCC
AAATATCTCACTTATTGTAACGATTCTTGTTATTTGGACACTCTCAGAGA
TTCCCTTGGGTAGATTTCAGACTCGTGTGAGTCTCTGTTAAAGTGACTAC
TCATGGCACACATCT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAATGTCAAAAAATTGTTCATATTTTG
GGTTTGTACCACAGTAAGCTCTACTAAAAGCAAAACAAACAAAAAAGTAT
CTATTTATGTTCATCTAAAAACTAATAGTGATATATTATTTTAAAATATC
ATACAGCTAATATATTTGGAGTTATTTAAAATTTATATTGAGATAAACTT
ATATATTTTCAGTATTGCTGTAGACAAGCATCTACATAAGACTGCTCAAT
TGATTGTTGTTTTATATCAAACAACTTTTATAATACTCATTTGTATTGTT
ACAATATTTTACAAATTTCTAAGAATATGATAAAAAACGAAAGGTATTTC
AGGGTTTGAAGGGGGGAGGTCCTCCAGGAGGAGTTGGGGTACAAAAGGGA
AAGAAGAATGTAATGTAAGTCTATTTACTCAAAATATGTTTTTAAAAGTT
AACAAATTCAGGTAAATTGAAATTGTGTATCGTTTCTCATCATAATGCAA
TAAAAGTTAAATAAAGAAAAACAAAACAAAACAAAAGAAAGGTGTCATGC
ACTGGGCACTGTCTGTGCGCGTTTGTGCCTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTNNNNTNNNNNTNNNNNNNNNTTNNNTTTTT
NTNTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTGTNTTTTTTTT
TNNTTTTATN

Query= MSMg01no288_b12.b1 MSMg01no288_b12.b1 CHROMAT_FILE:
MSMg01no288_b12.b1 PHD_FILE: MSMg01no288_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:06 2005
         (664 letters)



>mm_chr10_117664959_117666022
          Length = 1064

 Score = 1228 bits (635), Expect = 0.0
 Identities = 657/669 (98%), Gaps = 9/669 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttcagctcttgacataaatgatgcaatagattatttatgcatgagaacctgga 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaattccttcagctcttgaaataaatgatgcaatagattatttatgcatgagaacctgga 255

                                                                       
Query: 65  agaaaaatatacacagagcactgtaattgactcatattttaaacatctgattggtggtat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agaaaaatatacacagagcactgtaattgactcatattttaaacatctgattggtggtat 315

                                                                       
Query: 125 gcagtcaacagtaaacattttatttattttaatcccagggctggagagatggctcagcag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcagtcaacagtaaacattttatttattttaatcccagggctggagagatggctcagcag 375

                                                                       
Query: 185 ataagagcatttactaatcttgcatagtttggtttccaacacccagtctgatggctccaa 244
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 376 ataagagcatttactaatcttgcatagtttgatttccaacacccagtctgatggctccaa 435

                                                                       
Query: 245 accacctgtaaccctagcttcc------ggggtgggggtggggaggcactgactctggtc 298
           ||||||||||||||||||||||      ||||||||||||||||||||||||||||||||
Sbjct: 436 accacctgtaaccctagcttccggggtgggggtgggggtggggaggcactgactctggtc 495

                                                                       
Query: 299 tctgtaggcacctgtatttatacccacatgtgtgtgcacgcaaacagctacccactccta 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctgtaggcacctgtatttatacccacatgtgtgtgcacgcaaacagctacccactccta 555

                                                                       
Query: 359 aaaataa---gagtaaatcttaaaattttctgtctcttaaggtattaaatcacttaacaa 415
           |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaaataataggagtaaatcttaaaattttctgtctcttaaggtattaaatcacttaacaa 615

                                                                       
Query: 416 attaaacctaagcttgagaaaaggggtggggcaggtaacccagtatgagtagagatccaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 attaaacctaagcttgagaaaaggggtggggcaggtaacccagtatgagtagagatccaa 675

                                                                       
Query: 476 gtttcaaaaccagatcccttaaagcttaatagtgttgtctattcatttcttcacagggaa 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtttcaaaaccagatcccttaaagcttaatagtgttgtctattcatttcttcacagggaa 735

                                                                       
Query: 536 catgtgaaagttatgtaataaacgtgtgttccaatgacctgaaaattggctactagttgc 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 catgtgaaagttatgtaataaacgtgtgttccaatgacctgaaaattggctactagttgc 795

                                                                       
Query: 596 ctccccttccaaatatctcacttattgtaacgattcttgttatttggacactctcagaga 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 796 ctccccttccaaatatctcacttattgtaacgattcttgttatttggacactctcggaga 855

                    
Query: 656 ttcccttgg 664
           |||||||||
Sbjct: 856 ttcccttgg 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)