Query= MSMg01no292_g22.b1 MSMg01no292_g22.b1 CHROMAT_FILE:
MSMg01no292_g22.b1 PHD_FILE: MSMg01no292_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:30 2005
(322 letters)
>mm_chr10_112455972_112456697
Length = 726
Score = 495 bits (256), Expect = e-144
Identities = 298/314 (94%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 5 gaattcttagcatataaaccaacagtctagcaactaaataaataataagtattaattctg 64
|||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||
Sbjct: 205 gaattcttagcatataaatcaacagtctagtaactaaataaatgctaagtattaattctg 264
Query: 65 cttcattgtatatgttaatatttaggaagagtagatgtagtgcattagttaattataacc 124
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 265 cttcattgtatatgttaatatttaagaagagtaaatgtagtgcattagttaattataacc 324
Query: 125 atgattactcaagttattctccttaaggatggcaagcaaaccaggggtttagaactgatt 184
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 325 atgattactcaagttattctccttaaggatggcaagcaaacaatgggtttagaactgatt 384
Query: 185 atgtggcttccactgataccttagaacaaacaatcaagagaaggcaagtatcgctgactg 244
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 385 atgtggcttccactgataccttagaacaaacaatcacgagaaggtaagtatcgctgactg 444
Query: 245 ----gaagaataataaaggtataatgatgggtcataaaagacatcctatgatcactggat 300
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 tctggaagaataataaaagtataatgatgggtcataaaagacatcctatgatcaatggat 504
Query: 301 actctagaactctg 314
||||||||||||||
Sbjct: 505 actctagaactctg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 726
Length adjustment: 9
Effective length of query: 313
Effective length of database: 717
Effective search space: 224421
Effective search space used: 224421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_g22.g1 MSMg01no292_g22.g1 CHROMAT_FILE:
MSMg01no292_g22.g1 PHD_FILE: MSMg01no292_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:30 2005
(292 letters)
>mm_chr10_112616441_112617132
Length = 692
Score = 511 bits (264), Expect = e-149
Identities = 285/292 (97%)
Strand = Plus / Minus
Query: 1 atgaaaaacagaatcaccaggtagcaagccagcattggttcattatttagatatttattt 60
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 578 atgaaagacagaatcaccaggtagcaagccagcattggttcattatttagttatttattt 519
Query: 61 gtaaatatgtaaaaaaatatttttttgtcaaaacttcaagtcaaggaatacagaacacag 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 518 gtaaatatgtaaaaaaatatttttttgtcaaaacttcaaatcaaggaatacagaacacag 459
Query: 121 gaaatctaaaattacagaataattatcacaccagatttatttacttgtcgtgggacaaga 180
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 458 gaaatctgaaattacagaataattatcacaccagatttatttacttgttgtgggacaaga 399
Query: 181 gtcactctgaaacaagtacaggtcttctcaaggctgcgtatcctgttgaacagaaagtct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtcactctgaaacaagttcaggtcttctcaaggctgcgtatcctgttgaacagaaagtct 339
Query: 241 ctccagatgataagatgtcttagatcagagaagactggataaatgagagagg 292
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 338 ctccagatgataagatgtcttagatcagagaagactgaataaatgagagagg 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
