Query= MSMg01no297_b22.b1 MSMg01no297_b22.b1 CHROMAT_FILE:
MSMg01no297_b22.b1 PHD_FILE: MSMg01no297_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:29 2005
(672 letters)
>mm_chr10_30086509_30087580
Length = 1072
Score = 1266 bits (655), Expect = 0.0
Identities = 667/671 (99%)
Strand = Plus / Plus
Query: 1 gacaatacttccttttaactcttggtctgtccccattgtcatgatgacagcagtaaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacaatacttccttttaactcttggtctgtccccattgtcatgatgacagcagtaaagtc 260
Query: 61 cacaggtgcttagtacttcctaggatcacccctaagggctccccagcctccaaggttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaggtgcttagtacttcctaggatcacccctaagggctccccagcctccaaggttgcc 320
Query: 121 tagcaaggttaattagtgagtcactcttacacccttcttcactccaagtcttcagagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagcaaggttaattagtgagtcactcttacacccttcttcactccaagtcttcagagagt 380
Query: 181 tgggcattttgtgacttaaccagtcatttccttctgtttatggctggattattttggtcc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggcattttgtgacttaaccagccatttccttctgtttatggctggattattttggtcc 440
Query: 241 atacaacacctcatacacctctaccatccctggacagttcccttctagttcatccttgag 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 atacaacacctcaaacacctctaccatccctggacagttcccttctagttcatcctcgag 500
Query: 301 gctctgtttactggagaagctcttacttttggttccttccacttggggcactctttggaa 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gctctgtttactggagaagctcttacttttggtcccttccacttggggcactctttggaa 560
Query: 361 aaactggctcataaaaagttcttcttggccttatcgtgacctgaacattgtgttaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaactggctcataaaaagttcttcttggccttatcgtgacctgaacattgtgttaacaaa 620
Query: 421 gcaccctgttaatgttttgaccacaagaactaatgtgcttaggctggacagtggtgccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaccctgttaatgttttgaccacaagaactaatgtgcttaggctggacagtggtgccag 680
Query: 481 aacagtgcttgcacctaaaaagggaaagtttaattctattttcaaaataagtcatcttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacagtgcttgcacctaaaaagggaaagtttaattctattttcaaaataagtcatcttac 740
Query: 541 ccttgctatattaggaaatgtcatcaatcaaggcaagatgcctgtagtgtgtgggtgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccttgctatattaggaaatgtcatcaatcaaggcaagatgcctgtagtgtgtgggtgtga 800
Query: 601 gcatgtggaagctgggaaaagagtgtatgaattcccttgctaatccagtatcttggagcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcatgtggaagctgggaaaagagtgtatgaattcccttgctaatccagtatcttggagcc 860
Query: 661 acaaatctcac 671
|||||||||||
Sbjct: 861 acaaatctcac 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_b22.g1 MSMg01no297_b22.g1 CHROMAT_FILE:
MSMg01no297_b22.g1 PHD_FILE: MSMg01no297_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:29 2005
(673 letters)
>mm_chr10_30254326_30255402
Length = 1077
Score = 1255 bits (649), Expect = 0.0
Identities = 669/679 (98%), Gaps = 8/679 (1%)
Strand = Plus / Minus
Query: 1 ccaagtgtgatgcagatgtagggtgtgtattcatactgtaaagccaagcaaatgtattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 ccaagtgtgatgcagatgtagggtgtgtattcatactgtaaagccaagcaaatgtattgt 818
Query: 61 gacttgcttagagaatgactagtctggttacaagaggtttacaaaagaaataacttacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gacttgcttagagaatgactagtctggttacaagaggtttacaaaagaaataacttacat 758
Query: 121 gtctttatattttgtattttctatccttccagaaccgggacaagtattcacacctgctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gtctttatattttgtattttctatccttccagaaccgggacaagtattcacacctgctga 698
Query: 181 gtgatcattttctgccgtaccaaggacataattctttccgtgagaaatattttagtggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gtgatcattttctgccgtaccaaggacataattctttccgtgagaaatattttagtggtg 638
Query: 241 taacaaaaagaattgccaaggaagaaaaatgcagccacgagtgaaaactctgatgctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 taacaaaaagaattgccaaggaagaaaaatgcagccacgagtgaaaactctgatgctgac 578
Query: 301 aatcaggaaagaaggagcgttttataaaaaggctttggatgggaatttgtgcatatgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aatcaggaaagaaggagcgttttataaaaaggctttggatgggaatttgtgcatatgatt 518
Query: 361 taaaaaacctgtgctgatttacaatttttatataaataactgctattaatcaaaattgga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 -aaaaaacctgtgctgatttacaatttttatataaataactgctattaatcaaaattgga 459
Query: 421 taatttaaaaatggtctttgttttagagactattttgatgtatatgtcttttgagccttg 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 taatttcaaaatggtctttgttttagagactattttgatgtatatgtcttttgagccttg 399
Query: 481 ttaagtgtcagggactg------atatatatagagagacaaagtgtttatattttttaca 534
||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct: 398 ttaagtgtcagggactggtatatatatatatagagagagaaagtgtttatattttt-aca 340
Query: 535 aagacaatattgtatctgccacatacatggtaggtaattaatagtgatttagaacttact 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aagacaatattgtatctgccacatacatggtaggtaattaatagtgatttagaacttact 280
Query: 595 cattttgtaaagttgcttggtttgacttttagttgtgactgtttttcattgacaccaata 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cattttgtaaagttgcttggtttgacttttagttgtgactgtttttcattgacaccaata 220
Query: 655 aactttactgggaatttct 673
|||||||||||||||||||
Sbjct: 219 aactttactgggaatttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1077
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1067
Effective search space: 707421
Effective search space used: 707421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
