Query= MSMg01no297_j05.b1 MSMg01no297_j05.b1 CHROMAT_FILE:
MSMg01no297_j05.b1 PHD_FILE: MSMg01no297_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:03 2005
(249 letters)
>mm_chr10_126083878_126084526
Length = 649
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Minus
Query: 1 gcgcagctggtaagcgagtctgatcacatgacagagttgccgcacccagtgttatccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gcgcagctggtaagcgagtctgatcacatgacagagttgccgcacccagtgttatccttg 389
Query: 61 aagccactggctgctgacccatggagcggagcctatgtgaatagtttaccctggtttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aagccactggctgctgacccatggagcggagcctatgtgaatagtttaccctggtttctt 329
Query: 121 ttctgtaatttccctcatccgggaatggaaggtgagggaggagaataaagtgagccactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttctgtaatttccctcatccgggaatggaaggtgagggaggagaataaagtgagccactt 269
Query: 181 atttgtcatcaaaattcaaaaaccctgcttctgtcctaggctggagtcctggagaggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atttgtcatcaaaattcaaaaaccctgcttctgtcctaggctggagtcctggagaggagc 209
Query: 241 ggacagag 248
||||||||
Sbjct: 208 ggacagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no297_j05.g1 MSMg01no297_j05.g1 CHROMAT_FILE:
MSMg01no297_j05.g1 PHD_FILE: MSMg01no297_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:03 2005
(200 letters)
>mm_chr10_125927961_125928557
Length = 597
Score = 300 bits (155), Expect = 4e-86
Identities = 186/199 (93%), Gaps = 8/199 (4%)
Strand = Plus / Plus
Query: 1 gagcagacattttttttttggcatttgtttttatataacttatttccccctggattatat 60
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 gagcagacattttttt---ggcatttgtttttatataacttatttccctttggattatat 260
Query: 61 aaactagatgaaatgtataaaatgagaattcaatgggaaaggacgacagttcagatatag 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 261 aaactagatgaaatgtataaaatgagaattcaatggaaaaggacgacagttcagata--g 318
Query: 121 agagagaaatgtatatatatatttcactaatacacagccttgttatagtggtcatggtg- 179
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 319 agagagaaatgtatatatat--ttcactaatacacagccttattatagtggtcatggtgt 376
Query: 180 gtgtgtgtgtgtgtgtgtg 198
||||| |||||||||||||
Sbjct: 377 gtgtgcgtgtgtgtgtgtg 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 597
Length adjustment: 8
Effective length of query: 192
Effective length of database: 589
Effective search space: 113088
Effective search space used: 113088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
