Query= MSMg01no299_j10.b1 MSMg01no299_j10.b1 CHROMAT_FILE:
MSMg01no299_j10.b1 PHD_FILE: MSMg01no299_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:33 2005
(462 letters)
>mm_chr10_84032179_84033040
Length = 862
Score = 607 bits (314), Expect = e-178
Identities = 356/376 (94%), Gaps = 12/376 (3%)
Strand = Plus / Minus
Query: 3 ggaattcacccaca-----tttccctcaccctattggctttgctcttaattagcagccac 57
|||||||||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 371 ggaattcacccacaaaggct-----tcaccctattggctttactcttaattagcagccac 317
Query: 58 cacccacccccccagcacctggtctgattatgtgtctatgtgtctgtgaccttaagcgtc 117
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cccccccccccccagcacctggtctgattatgtgtctatgtgtctgtgaccttaagcgtc 257
Query: 118 acagttgggatgacattcccatacacaaaatgtcgtggcgggaatctctctgcaagaatc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acagttgggatgacattcccatacacaaaatgtcgtggcgggaatctctctgcaagaatc 197
Query: 178 attcccacacctacgagagtggaagccaggacagccccctggaattcttggtcccaggtc 237
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 196 attcccacacctacgagagtggaagccaggacagccccctggaatgcttggtcccaggtc 137
Query: 238 cagtttgcattctcagtttatactctaaaacgacaaggtatggtggacaagcaagcaagg 297
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 136 cagtttgcattctcagtttatactctaaaacgacaaggtggggtggacaagcaagcaagg 77
Query: 298 tttttacagaagcacaaatggtggtcagccttctctctt--aaaaggctttcttcaaaag 355
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 76 tttttacagaagcacaaatggcagtcagccttctctcttttaaaaggctttcttcaaaag 17
Query: 356 ctgacaggtgtaagct 371
||||||||||||||||
Sbjct: 16 ctgacaggtgtaagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_j10.g1 MSMg01no299_j10.g1 CHROMAT_FILE:
MSMg01no299_j10.g1 PHD_FILE: MSMg01no299_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:33 2005
(195 letters)
>mm_chr10_83847316_83847910
Length = 595
Score = 352 bits (182), Expect = e-102
Identities = 191/194 (98%)
Strand = Plus / Plus
Query: 1 aacggagacaagccaggcagtggaaacctactcctacctggtcctccagcctgcatcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacggagacaagccaggcagtggaaacctactcctacctggtcctccagcctgcatcatc 260
Query: 61 atcgactcatagcgtcttagaagacagactttaagcccgttcgtccccaggccctttaca 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcgcctcatagcgtcttagaagacagactttaagcccgttcgtccccaggccctttaca 320
Query: 121 gtagctctggctggctacactgttaagatttggagaaagaggcctcgctgtgctttggtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 321 gtagctctggctggctacactgttaagatttggagaaagaggcctcgctgtgttttgggg 380
Query: 181 tgggtgggggttgt 194
||||||||||||||
Sbjct: 381 tgggtgggggttgt 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
