Query= MSMg01no300_b16.b1 MSMg01no300_b16.b1 CHROMAT_FILE:
MSMg01no300_b16.b1 PHD_FILE: MSMg01no300_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:12 2005
(322 letters)
>mm_chr10_96491605_96492325
Length = 721
Score = 563 bits (291), Expect = e-165
Identities = 312/319 (97%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagcgtatagcctgttcttaattagcctttgttgttttgttgctagtgtttgtt 64
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 205 gaattcaagcgtatagcctgttcttaattagcctttgttg-tttgttgctggtgtttgtt 263
Query: 65 gttttggtccttatctccttttctgtatgatactcaatagaatagtagtacaccacctct 124
|||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 gttttggtccgtat-ttcttttctgtatgatactcaattgaatagtagtacaccacctct 322
Query: 125 agtaagaaaacagaaaatgaatgtgcatatatatgaatgtacaaggacatacatagacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtaagaaaacagaaaatgaatgtgcatatatatgaatgtacaaggacatacatagacac 382
Query: 185 atgtgtatgaattgagttctttatgtagtttcagatattgacagaagaaaaaaaaa-gaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 383 atgtgtatgaattgagttctttatgtagtttcagatattgacagaagaaaaaaaaaagaa 442
Query: 244 ttgagtttaagctctacagatcaaattggcagagaggcaaagaacaacacactgcttttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgagtttaagctctacagatcaaattggcagagaggcaaagaacaacacactgcttttg 502
Query: 304 ttattctaagcctgaaatg 322
|||||||||||||||||||
Sbjct: 503 ttattctaagcctgaaatg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_b16.g1 MSMg01no300_b16.g1 CHROMAT_FILE:
MSMg01no300_b16.g1 PHD_FILE: MSMg01no300_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:12 2005
(242 letters)
>mm_chr10_96655934_96656573
Length = 640
Score = 397 bits (205), Expect = e-115
Identities = 232/241 (96%), Gaps = 2/241 (0%)
Strand = Plus / Minus
Query: 2 agaaaaaaaaatccagggcttggaaacacccagcatttagagaaaaggacactacatgga 61
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 agaaaaaaaaat-cagggcttggaaacacccagcatttagagaaaaggagactacatgga 382
Query: 62 taagaactcatggttctgctatcagctttcgctgaagggaggctctgactcctgagttgc 121
||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 381 taagagctcatgcttctgctatcagctttctctgaagggaggttctgactcctgagttgc 322
Query: 122 aagtgtgcacagcgagacagacagtggaggagttagaatgcttgctacttacaggttaaa 181
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aagtgtgcacagcgagacagacagtggaggaattagaatgcttgctacttacaggttaaa 262
Query: 182 gagacaaacagataaagcagatgtcctttaaaaacaaaacctgctgctccctgatgctga 241
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 261 gagacaaacagataaagcagatgtcctttaaaaacaaaacctgc-gttccctgatgctga 203
Query: 242 g 242
|
Sbjct: 202 g 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 640
Length adjustment: 9
Effective length of query: 233
Effective length of database: 631
Effective search space: 147023
Effective search space used: 147023
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
